MRIQC#
Author: Monika Doerig
Citation:
MRIQC:
Esteban O, Birman D, Schaer M, Koyejo OO, Poldrack RA, Gorgolewski KJ; MRIQC: Advancing the Automatic Prediction of Image Quality in MRI from Unseen Sites; PLOS ONE 12(9):e0184661; doi:10.1371/journal.pone.0184661
The documentation of this project is found here.
Data from OpenNeuro: Flanker Dataset
Kelly AMC and Uddin LQ and Biswal BB and Castellanos FX and Milham MP (2018). Flanker task (event-related). OpenNeuro Dataset ds000102. [Dataset] doi: null
Kelly AM, Uddin LQ, Biswal BB, Castellanos FX, Milham MP. Competition between functional brain networks mediates behavioral variability. Neuroimage. 2008 Jan 1;39(1):527-37. doi: 10.1016/j.neuroimage.2007.08.008. Epub 2007 Aug 23. PMID: 17919929.
Mennes, M., Kelly, C., Zuo, X.N., Di Martino, A., Biswal, B.B., Castellanos, F.X., Milham, M.P. (2010). Inter-individual differences in resting-state functional connectivity predict task-induced BOLD activity. Neuroimage, 50(4):1690-701. doi: 10.1016/j.neuroimage.2010.01.002. Epub 2010 Jan 15. Erratum in: Neuroimage. 2011 Mar 1;55(1):434
Mennes, M., Zuo, X.N., Kelly, C., Di Martino, A., Zang, Y.F., Biswal, B., Castellanos, F.X., Milham, M.P. (2011). Linking inter-individual differences in neural activation and behavior to intrinsic brain dynamics. Neuroimage, 54(4):2950-9. doi: 10.1016/j.neuroimage.2010.10.046
Output CPU information#
!cat /proc/cpuinfo | grep 'vendor' | uniq
!cat /proc/cpuinfo | grep 'model name' | uniq
vendor_id : AuthenticAMD
model name : AMD EPYC-Rome Processor
Load MRIQC#
import module
await module.purge()
await module.load('mriqc/22.0.6')
await module.list()
Lmod Warning: The environment MODULEPATH has been changed in unexpected ways.
Lmod is unable to use given MODULEPATH. It is using:
"/cvmfs/neurodesk.ardc.edu.au/neurodesk-modules/functional_imaging:/cvmfs/neurodesk.ardc.edu.au/neurodesk-modules/rodent_imaging:/cvmfs/neurodesk.ardc.edu.au/neurodesk-modules/image_registration:/cvmfs/neurodesk.ardc.edu.au/neurodesk-modules/structural_imaging:/cvmfs/neurodesk.ardc.edu.au/neurodesk-modules/image_segmentation:/cvmfs/neurodesk.ardc.edu.au/neurodesk-modules/quantitative_imaging:/cvmfs/neurodesk.ardc.edu.au/neurodesk-modules/workflows:/cvmfs/neurodesk.ardc.edu.au/neurodesk-modules/hippocampus:/cvmfs/neurodesk.ardc.edu.au/neurodesk-modules/image_reconstruction:/cvmfs/neurodesk.ardc.edu.au/neurodesk-modules/data_organisation:/cvmfs/neurodesk.ardc.edu.au/neurodesk-modules/electrophysiology:/cvmfs/neurodesk.ardc.edu.au/neurodesk-modules/phase_processing:/cvmfs/neurodesk.ardc.edu.au/neurodesk-modules/programming:/cvmfs/neurodesk.ardc.edu.au/neurodesk-modules/machine_learning:/cvmfs/neurodesk.ardc.edu.au/neurodesk-modules/diffusion_imaging:/cvmfs/neurodesk.ardc.edu.au/neurodesk-modules/body:/cvmfs/neurodesk.ardc.edu.au/neurodesk-modules/visualization:/cvmfs/neurodesk.ardc.edu.au/neurodesk-modules/spectroscopy:/cvmfs/neurodesk.ardc.edu.au/neurodesk-modules/quality_control:/cvmfs/neurodesk.ardc.edu.au/neurodesk-modules/statistics:/cvmfs/neurodesk.ardc.edu.au/neurodesk-modules/shape_analysis:/cvmfs/neurodesk.ardc.edu.au/neurodesk-modules/spine:/cvmfs/neurodesk.ardc.edu.au/neurodesk-modules/molecular_biology:/cvmfs/neurodesk.ardc.edu.au/neurodesk-modules/bids_apps:/cvmfs/neurodesk.ardc.edu.au/neurodesk-modules/cryo_EM:/cvmfs/neurodesk.ardc.edu.au/neurodesk-modules/other::".
Please use "module use ..." to change MODULEPATH instead.
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'Please',
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'instead.',
'mriqc/22.0.6']
!mriqc -h
You are using MRIQC v22.0.6, and a newer version is available: 24.0.2.
usage: mriqc [-h] [--version] [-v] [--species {human,rat}]
[--participant-label PARTICIPANT_LABEL [PARTICIPANT_LABEL ...]]
[--session-id [SESSION_ID ...]] [--run-id [RUN_ID ...]]
[--task-id [TASK_ID ...]] [-m [MODALITIES ...]] [--dsname DSNAME]
[--bids-database-dir PATH] [--nprocs NPROCS]
[--omp-nthreads OMP_NTHREADS] [--mem MEMORY_GB] [--testing] [-f]
[--pdb] [-w WORK_DIR] [--verbose-reports] [--write-graph]
[--dry-run] [--resource-monitor] [--use-plugin USE_PLUGIN]
[--no-sub] [--email EMAIL] [--webapi-url WEBAPI_URL]
[--webapi-port WEBAPI_PORT] [--upload-strict] [--ants-float]
[--ants-settings ANTS_SETTINGS] [--ica] [--fft-spikes-detector]
[--fd_thres FD_THRES] [--deoblique] [--despike]
[--start-idx START_IDX] [--stop-idx STOP_IDX]
bids_dir output_dir {participant,group} [{participant,group} ...]
MRIQC 22.0.6 Automated Quality Control and visual reports for Quality
Assesment of structural (T1w, T2w) and functional MRI of the brain. IMPORTANT:
Anonymized quality metrics (IQMs) will be submitted to MRIQC's metrics
repository. Submission of IQMs can be disabled using the ``--no-sub``
argument. Please visit https://mriqc.readthedocs.io/en/latest/dsa.html to
revise MRIQC's Data Sharing Agreement.
positional arguments:
bids_dir The root folder of a BIDS valid dataset (sub-XXXXX
folders should be found at the top level in this
folder).
output_dir The directory where the output files should be stored.
If you are running group level analysis this folder
should be prepopulated with the results of the
participant level analysis.
{participant,group} Level of the analysis that will be performed. Multiple
participant level analyses can be run independently
(in parallel) using the same output_dir.
optional arguments:
-h, --help show this help message and exit
--version show program's version number and exit
-v, --verbose Increases log verbosity for each occurrence, debug
level is -vvv. (default: 0)
--species {human,rat}
Use appropriate template for population (default:
human)
Options for filtering BIDS queries:
--participant-label PARTICIPANT_LABEL [PARTICIPANT_LABEL ...], --participant_label PARTICIPANT_LABEL [PARTICIPANT_LABEL ...], --participant-labels PARTICIPANT_LABEL [PARTICIPANT_LABEL ...], --participant_labels PARTICIPANT_LABEL [PARTICIPANT_LABEL ...]
A space delimited list of participant identifiers or a
single identifier (the sub- prefix can be removed).
(default: None)
--session-id [SESSION_ID ...]
Filter input dataset by session ID. (default: None)
--run-id [RUN_ID ...]
Filter input dataset by run ID (only integer run IDs
are valid). (default: None)
--task-id [TASK_ID ...]
Filter input dataset by task ID. (default: None)
-m [MODALITIES ...], --modalities [MODALITIES ...]
Filter input dataset by MRI type. (default: None)
--dsname DSNAME A dataset name. (default: None)
--bids-database-dir PATH
Path to an existing PyBIDS database folder, for faster
indexing (especially useful for large datasets).
(default: None)
Options to handle performance:
--nprocs NPROCS, --n_procs NPROCS, --n_cpus NPROCS, -n-cpus NPROCS
Maximum number of simultaneously running parallel
processes executed by *MRIQC* (e.g., several instances
of ANTs' registration). However, when ``--nprocs`` is
greater or equal to the ``--omp-nthreads`` option, it
also sets the maximum number of threads that
simultaneously running processes may aggregate
(meaning, with ``--nprocs 16 --omp-nthreads 8`` a
maximum of two 8-CPU-threaded processes will be
running at a given time). Under this mode of
operation, ``--nprocs`` sets the maximum number of
processors that can be assigned work within an *MRIQC*
job, which includes all the processors used by
currently running single- and multi-threaded
processes. If ``None``, the number of CPUs available
will be automatically assigned (which may not be what
you want in, e.g., shared systems like a HPC cluster.
(default: None)
--omp-nthreads OMP_NTHREADS, --ants-nthreads OMP_NTHREADS
Maximum number of threads that multi-threaded
processes executed by *MRIQC* (e.g., ANTs'
registration) can use. If ``None``, the number of CPUs
available will be automatically assigned (which may
not be what you want in, e.g., shared systems like a
HPC cluster. (default: None)
--mem MEMORY_GB, --mem_gb MEMORY_GB, --mem-gb MEMORY_GB
Upper bound memory limit for MRIQC processes.
(default: None)
--testing Use testing settings for a minimal footprint.
(default: False)
-f, --float32 Cast the input data to float32 if it's represented in
higher precision (saves space and improves
perfomance). (default: True)
--pdb Open Python debugger (pdb) on exceptions. (default:
False)
Instrumental options:
-w WORK_DIR, --work-dir WORK_DIR
Path where intermediate results should be stored.
(default: /storage/tmp/tmpixmeqv8h/work)
--verbose-reports
--write-graph Write workflow graph. (default: False)
--dry-run Do not run the workflow. (default: False)
--resource-monitor, --profile
Hook up the resource profiler callback to nipype.
(default: False)
--use-plugin USE_PLUGIN
Nipype plugin configuration file. (default: None)
--no-sub Turn off submission of anonymized quality metrics to
MRIQC's metrics repository. (default: False)
--email EMAIL Email address to include with quality metric
submission. (default: )
--webapi-url WEBAPI_URL
IP address where the MRIQC WebAPI is listening.
(default: None)
--webapi-port WEBAPI_PORT
Port where the MRIQC WebAPI is listening. (default:
None)
--upload-strict Upload will fail if upload is strict. (default: False)
Specific settings for ANTs:
--ants-float Use float number precision on ANTs computations.
(default: False)
--ants-settings ANTS_SETTINGS
Path to JSON file with settings for ANTs. (default:
None)
Functional MRI workflow configuration:
--ica Run ICA on the raw data and include the components in
the individual reports (slow but potentially very
insightful). (default: False)
--fft-spikes-detector
Turn on FFT based spike detector (slow). (default:
False)
--fd_thres FD_THRES Threshold on framewise displacement estimates to
detect outliers. (default: 0.2)
--deoblique Deoblique the functional scans during head motion
correction preprocessing. (default: False)
--despike Despike the functional scans during head motion
correction preprocessing. (default: False)
--start-idx START_IDX
DEPRECATED Initial volume in functional timeseries
that should be considered for preprocessing. (default:
None)
--stop-idx STOP_IDX DEPRECATED Final volume in functional timeseries that
should be considered for preprocessing. (default:
None)
Data preparation#
!datalad install https://github.com/OpenNeuroDatasets/ds000102.git
!cd ds000102 && datalad get sub-01 sub-02 sub-03
Clone attempt: 0%| | 0.00/2.00 [00:00<?, ? Candidate locations/s]
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[INFO ] scanning for unlocked files (this may take some time)
[INFO ] Remote origin not usable by git-annex; setting annex-ignore
[INFO ] access to 1 dataset sibling s3-PRIVATE not auto-enabled, enable with:
| datalad siblings -d "/storage/tmp/tmpixmeqv8h/ds000102" enable -s s3-PRIVATE
install(ok): /storage/tmp/tmpixmeqv8h/ds000102 (dataset)
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Get sub-02/f .. _bold.nii.gz: 87%|██▌| 25.3M/29.2M [00:02<00:00, 10.6M Bytes/s]
Get sub-02/f .. _bold.nii.gz: 94%|██▊| 27.6M/29.2M [00:02<00:00, 10.4M Bytes/s]
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get(ok): sub-03/anat/sub-03_T1w.nii.gz (file) [from s3-PUBLIC...]
get(ok): sub-03/func/sub-03_task-flanker_run-1_bold.nii.gz (file) [from s3-PUBLIC...]
get(ok): sub-03/func/sub-03_task-flanker_run-2_bold.nii.gz (file) [from s3-PUBLIC...]
get(ok): sub-02/anat/sub-02_T1w.nii.gz (file) [from s3-PUBLIC...]
get(ok): sub-02/func/sub-02_task-flanker_run-1_bold.nii.gz (file) [from s3-PUBLIC...]
get(ok): sub-02/func/sub-02_task-flanker_run-2_bold.nii.gz (file) [from s3-PUBLIC...]
get(ok): sub-01/anat/sub-01_T1w.nii.gz (file) [from s3-PUBLIC...]
get(ok): sub-01/func/sub-01_task-flanker_run-1_bold.nii.gz (file) [from s3-PUBLIC...]
get(ok): sub-01/func/sub-01_task-flanker_run-2_bold.nii.gz (file) [from s3-PUBLIC...]
get(ok): sub-03 (directory)
get(ok): sub-02 (directory)
get(ok): sub-01 (directory)
action summary:
get (ok: 12)
The following section outlines key MRIQC command-line options used in this analysis. These include required positional arguments for specifying input and output directories, as well as optional flags for performance optimization and report generation. For a complete list of available options, refer to the official documentation.
Positional Arguments#
bids_dir: The root folder of a BIDS valid dataset (sub-XXXXX folders should be found at the top level in this folder).output_dir: The directory where the output files should be stored. If you are running group level analysis this folder should be prepopulated with the results of the participant level analysis.analysis_level: Possible choices: participant, group
Level of the analysis that will be performed. Multiple participant level analyses can be run independently (in parallel) using the same output_dir.
-v, --verbose: Increases log verbosity for each occurrence, debug level is -vvv.
Options to handle performance#
--nprocs, --n_procs, --n_cpus, -n-cpusMaximum number of simultaneously running parallel processes executed by MRIQC (e.g., several instances of ANTs’ registration). However, when –nprocs is greater or equal to the –omp-nthreads option, it also sets the maximum number of threads that simultaneously running processes may aggregate (meaning, with –nprocs 16 –omp-nthreads 8 a maximum of two 8-CPU-threaded processes will be running at a given time). Under this mode of operation, –nprocs sets the maximum number of processors that can be assigned work within an MRIQC job, which includes all the processors used by currently running single- and multi-threaded processes. If None, the number of CPUs available will be automatically assigned (which may not be what you want in, e.g., shared systems like a HPC cluster.--mem, --mem_gb, --mem-gb: Upper bound memory limit for MRIQC processes.
Instrumental options#
-w, --work-dir: Path where intermediate results should be stored.--verbose-reports: Generate verbose HTML reports with additional details--no-sub: Turn off submission of anonymized quality metrics to MRIQC’s metrics repository.
!
Warning:
--no-sub and --notrack may be necessary in environments with limited internet access, where automatic submission of quality metrics to MRIQC's web server and tracking data to NiPreps developers may fail or trigger runtime errors.
Participant-level Analysis#
%%bash
# Set the number of threads for ITK (Image Processing Toolkit) to use
export ITK_GLOBAL_DEFAULT_NUMBER_OF_THREADS=6
# Set the directory for matplotlib configuration to avoid conflicts
export MPLCONFIGDIR=~/matplotlib-mpldir
# Run MRIQC
mriqc ds000102 \
MRIQC \
participant \
--participant-label sub-01 sub-02 sub-03 \
--no-sub \
--work-dir MRIQC_workdir \
--nprocs 6 \
--mem-gb 10 \
--verbose-reports \
-v
250730-23:18:36,172 cli IMPORTANT:
Running MRIQC version 22.0.6:
* BIDS dataset path: /storage/tmp/tmpixmeqv8h/ds000102.
* Output folder: /storage/tmp/tmpixmeqv8h/MRIQC.
* Analysis levels: ['participant'].
250730-23:18:36,717 nipype.workflow INFO:
Building functional MRIQC workflow for files: /storage/tmp/tmpixmeqv8h/ds000102/sub-01/func/sub-01_task-flanker_run-1_bold.nii.gz, /storage/tmp/tmpixmeqv8h/ds000102/sub-01/func/sub-01_task-flanker_run-2_bold.nii.gz, /storage/tmp/tmpixmeqv8h/ds000102/sub-02/func/sub-02_task-flanker_run-1_bold.nii.gz, /storage/tmp/tmpixmeqv8h/ds000102/sub-02/func/sub-02_task-flanker_run-2_bold.nii.gz, /storage/tmp/tmpixmeqv8h/ds000102/sub-03/func/sub-03_task-flanker_run-1_bold.nii.gz, /storage/tmp/tmpixmeqv8h/ds000102/sub-03/func/sub-03_task-flanker_run-2_bold.nii.gz.
250730-23:18:39,36 nipype.workflow INFO:
Building anatomical MRIQC workflow for 3 NIfTI files..
250730-23:18:57,256 nipype.workflow INFO:
Workflow mriqc_wf settings: ['check', 'execution', 'logging', 'monitoring']
250730-23:18:57,628 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.datalad_get" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..anat..sub-01_T1w.nii.gz/datalad_get".
250730-23:18:57,629 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ComputeIQMs.metadata" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-1_bold.nii.gz/metadata".
250730-23:18:57,630 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.datalad_get" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..anat..sub-02_T1w.nii.gz/datalad_get".
250730-23:18:57,631 nipype.workflow INFO:
[Node] Executing "datalad_get" <mriqc.interfaces.datalad.DataladIdentityInterface>
250730-23:18:57,633 nipype.workflow INFO:
[Node] Executing "datalad_get" <mriqc.interfaces.datalad.DataladIdentityInterface>
250730-23:18:57,633 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.datalad_get" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..anat..sub-03_T1w.nii.gz/datalad_get".
250730-23:18:57,637 nipype.workflow INFO:
[Node] Executing "datalad_get" <mriqc.interfaces.datalad.DataladIdentityInterface>
250730-23:18:57,643 nipype.workflow INFO:
[Node] Executing "metadata" <niworkflows.interfaces.bids.ReadSidecarJSON>
250730-23:18:58,283 nipype.workflow INFO:
[Node] Finished "datalad_get", elapsed time 0.604661s.
250730-23:18:58,313 nipype.workflow INFO:
[Node] Finished "datalad_get", elapsed time 0.633735s.
250730-23:18:58,565 nipype.workflow INFO:
[Node] Finished "datalad_get", elapsed time 0.853764s.
250730-23:18:58,872 nipype.workflow INFO:
[Node] Finished "metadata", elapsed time 1.1917550000000001s.
250730-23:18:59,93 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ComputeIQMs.provenance" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-1_bold.nii.gz/provenance".
250730-23:18:59,96 nipype.workflow INFO:
[Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
250730-23:18:59,165 nipype.workflow INFO:
[Node] Finished "provenance", elapsed time 0.067034s.
250730-23:18:59,359 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ComputeIQMs.metadata" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-2_bold.nii.gz/metadata".
250730-23:18:59,361 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-1_bold.nii.gz/non_steady_state_detector".
250730-23:18:59,362 nipype.workflow INFO:
[Node] Executing "metadata" <niworkflows.interfaces.bids.ReadSidecarJSON>
250730-23:18:59,364 nipype.workflow INFO:
[Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
250730-23:18:59,765 nipype.workflow INFO:
[Node] Finished "non_steady_state_detector", elapsed time 0.399197s.
250730-23:19:00,306 nipype.workflow INFO:
[Node] Finished "metadata", elapsed time 0.943112s.
250730-23:19:00,498 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ComputeIQMs.provenance" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-2_bold.nii.gz/provenance".
250730-23:19:00,501 nipype.workflow INFO:
[Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
250730-23:19:00,565 nipype.workflow INFO:
[Node] Finished "provenance", elapsed time 0.062943s.
250730-23:19:00,763 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ComputeIQMs.metadata" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-1_bold.nii.gz/metadata".
250730-23:19:00,765 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-2_bold.nii.gz/non_steady_state_detector".
250730-23:19:00,767 nipype.workflow INFO:
[Node] Executing "metadata" <niworkflows.interfaces.bids.ReadSidecarJSON>
250730-23:19:00,767 nipype.workflow INFO:
[Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
250730-23:19:01,103 nipype.workflow INFO:
[Node] Finished "non_steady_state_detector", elapsed time 0.334693s.
250730-23:19:01,672 nipype.workflow INFO:
[Node] Finished "metadata", elapsed time 0.903724s.
250730-23:19:01,844 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ComputeIQMs.provenance" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-1_bold.nii.gz/provenance".
250730-23:19:01,846 nipype.workflow INFO:
[Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
250730-23:19:01,906 nipype.workflow INFO:
[Node] Finished "provenance", elapsed time 0.059101s.
250730-23:19:02,267 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ComputeIQMs.metadata" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-2_bold.nii.gz/metadata".
250730-23:19:02,269 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-1_bold.nii.gz/non_steady_state_detector".
250730-23:19:02,269 nipype.workflow INFO:
[Node] Executing "metadata" <niworkflows.interfaces.bids.ReadSidecarJSON>
250730-23:19:02,270 nipype.workflow INFO:
[Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
250730-23:19:02,539 nipype.workflow INFO:
[Node] Finished "non_steady_state_detector", elapsed time 0.267187s.
250730-23:19:03,658 nipype.workflow INFO:
[Node] Finished "metadata", elapsed time 1.387704s.
250730-23:19:03,846 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ComputeIQMs.provenance" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-2_bold.nii.gz/provenance".
250730-23:19:03,848 nipype.workflow INFO:
[Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
250730-23:19:03,912 nipype.workflow INFO:
[Node] Finished "provenance", elapsed time 0.061995s.
250730-23:19:04,94 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ComputeIQMs.metadata" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-1_bold.nii.gz/metadata".
250730-23:19:04,97 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-2_bold.nii.gz/non_steady_state_detector".
250730-23:19:04,97 nipype.workflow INFO:
[Node] Executing "metadata" <niworkflows.interfaces.bids.ReadSidecarJSON>
250730-23:19:04,99 nipype.workflow INFO:
[Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
250730-23:19:04,402 nipype.workflow INFO:
[Node] Finished "non_steady_state_detector", elapsed time 0.301769s.
250730-23:19:04,962 nipype.workflow INFO:
[Node] Finished "metadata", elapsed time 0.86295s.
250730-23:19:05,112 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ComputeIQMs.provenance" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-1_bold.nii.gz/provenance".
250730-23:19:05,116 nipype.workflow INFO:
[Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
250730-23:19:05,175 nipype.workflow INFO:
[Node] Finished "provenance", elapsed time 0.056881s.
250730-23:19:05,318 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ComputeIQMs.metadata" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-2_bold.nii.gz/metadata".
250730-23:19:05,320 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-1_bold.nii.gz/non_steady_state_detector".
250730-23:19:05,321 nipype.workflow INFO:
[Node] Executing "metadata" <niworkflows.interfaces.bids.ReadSidecarJSON>
250730-23:19:05,327 nipype.workflow INFO:
[Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
250730-23:19:05,831 nipype.workflow INFO:
[Node] Finished "non_steady_state_detector", elapsed time 0.499757s.
250730-23:19:06,113 nipype.workflow INFO:
[Node] Finished "metadata", elapsed time 0.791492s.
250730-23:19:06,265 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ComputeIQMs.provenance" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-2_bold.nii.gz/provenance".
250730-23:19:06,266 nipype.workflow INFO:
[Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
250730-23:19:06,330 nipype.workflow INFO:
[Node] Finished "provenance", elapsed time 0.062943s.
250730-23:19:06,685 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.non_steady_state_detector" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-2_bold.nii.gz/non_steady_state_detector".
250730-23:19:06,687 nipype.workflow INFO:
[Node] Executing "non_steady_state_detector" <nipype.algorithms.confounds.NonSteadyStateDetector>
250730-23:19:06,696 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.metadata" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..anat..sub-01_T1w.nii.gz/metadata".
250730-23:19:06,696 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.conform" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..anat..sub-01_T1w.nii.gz/conform".
250730-23:19:06,700 nipype.workflow INFO:
[Node] Executing "metadata" <niworkflows.interfaces.bids.ReadSidecarJSON>
250730-23:19:06,701 nipype.workflow INFO:
[Node] Executing "conform" <mriqc.interfaces.common.conform_image.ConformImage>
250730-23:19:06,704 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.conform" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..anat..sub-02_T1w.nii.gz/conform".
250730-23:19:06,710 nipype.workflow INFO:
[Node] Executing "conform" <mriqc.interfaces.common.conform_image.ConformImage>
250730-23:19:06,712 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.metadata" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..anat..sub-02_T1w.nii.gz/metadata".
250730-23:19:06,716 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.conform" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..anat..sub-03_T1w.nii.gz/conform".
250730-23:19:06,719 nipype.workflow INFO:
[Node] Executing "metadata" <niworkflows.interfaces.bids.ReadSidecarJSON>
250730-23:19:06,722 nipype.workflow INFO:
[Node] Executing "conform" <mriqc.interfaces.common.conform_image.ConformImage>
250730-23:19:07,84 nipype.workflow INFO:
[Node] Finished "non_steady_state_detector", elapsed time 0.395288s.
250730-23:19:07,516 nipype.workflow INFO:
[Node] Finished "conform", elapsed time 0.813663s.
250730-23:19:07,531 nipype.workflow INFO:
[Node] Finished "conform", elapsed time 0.816865s.
250730-23:19:07,585 nipype.workflow INFO:
[Node] Finished "conform", elapsed time 0.860363s.
250730-23:19:08,351 nipype.workflow INFO:
[Node] Finished "metadata", elapsed time 1.648081s.
250730-23:19:08,694 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.metadata" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..anat..sub-03_T1w.nii.gz/metadata".
250730-23:19:08,697 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.sanitize" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-1_bold.nii.gz/sanitize".
250730-23:19:08,698 nipype.workflow INFO:
[Node] Executing "metadata" <niworkflows.interfaces.bids.ReadSidecarJSON>
250730-23:19:08,699 nipype.workflow INFO:
[Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
250730-23:19:08,700 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.sanitize" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-2_bold.nii.gz/sanitize".
250730-23:19:08,701 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.sanitize" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-1_bold.nii.gz/sanitize".
250730-23:19:08,703 nipype.workflow INFO:
[Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
250730-23:19:08,702 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.sanitize" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-2_bold.nii.gz/sanitize".
250730-23:19:08,704 nipype.workflow INFO:
[Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
250730-23:19:08,708 nipype.workflow INFO:
[Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
250730-23:19:08,766 nipype.workflow INFO:
[Node] Finished "sanitize", elapsed time 0.062731s.
250730-23:19:08,823 nipype.workflow INFO:
[Node] Finished "metadata", elapsed time 2.102333s.
250730-23:19:08,824 nipype.workflow INFO:
[Node] Finished "sanitize", elapsed time 0.114776s.
250730-23:19:09,864 nipype.workflow INFO:
[Node] Finished "metadata", elapsed time 1.165054s.
250730-23:19:10,508 nipype.workflow INFO:
[Node] Finished "sanitize", elapsed time 1.8030680000000001s.
250730-23:19:10,673 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.sanitize" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-1_bold.nii.gz/sanitize".
250730-23:19:10,675 nipype.workflow INFO:
[Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
250730-23:19:10,676 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.sanitize" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-2_bold.nii.gz/sanitize".
250730-23:19:10,678 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_clip" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/synthstrip_wf/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..anat..sub-01_T1w.nii.gz/pre_clip".
250730-23:19:10,679 nipype.workflow INFO:
[Node] Executing "sanitize" <niworkflows.interfaces.header.SanitizeImage>
250730-23:19:10,680 nipype.workflow INFO:
[Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
250730-23:19:10,680 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.RotationMask" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/AirMaskWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..anat..sub-01_T1w.nii.gz/RotationMask".
250730-23:19:10,683 nipype.workflow INFO:
[Node] Executing "RotationMask" <mriqc.interfaces.anatomical.RotationMask>
250730-23:19:11,239 nipype.workflow INFO:
[Node] Finished "sanitize", elapsed time 2.538589s.
250730-23:19:12,329 nipype.workflow INFO:
[Node] Finished "RotationMask", elapsed time 1.645227s.
250730-23:19:12,410 nipype.workflow INFO:
[Node] Finished "sanitize", elapsed time 1.734267s.
250730-23:19:12,452 nipype.workflow INFO:
[Node] Finished "sanitize", elapsed time 1.771976s.
250730-23:19:12,737 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.ReportsWorkflow.PlotMosaicNoise" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..anat..sub-01_T1w.nii.gz/PlotMosaicNoise".
250730-23:19:12,740 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_clip" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/synthstrip_wf/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..anat..sub-02_T1w.nii.gz/pre_clip".
250730-23:19:12,741 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.RotationMask" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/AirMaskWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..anat..sub-02_T1w.nii.gz/RotationMask".
250730-23:19:12,742 nipype.workflow INFO:
[Node] Executing "PlotMosaicNoise" <mriqc.interfaces.viz.PlotMosaic>
250730-23:19:12,743 nipype.workflow INFO:
[Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
250730-23:19:12,744 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.ReportsWorkflow.PlotMosaicNoise" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..anat..sub-02_T1w.nii.gz/PlotMosaicNoise".
250730-23:19:12,745 nipype.workflow INFO:
[Node] Executing "RotationMask" <mriqc.interfaces.anatomical.RotationMask>
250730-23:19:12,745 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_clip" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/synthstrip_wf/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..anat..sub-03_T1w.nii.gz/pre_clip".
250730-23:19:12,747 nipype.workflow INFO:
[Node] Executing "PlotMosaicNoise" <mriqc.interfaces.viz.PlotMosaic>
250730-23:19:12,750 nipype.workflow INFO:
[Node] Executing "pre_clip" <niworkflows.interfaces.nibabel.IntensityClip>
250730-23:19:14,278 nipype.workflow INFO:
[Node] Finished "RotationMask", elapsed time 1.530341s.
250730-23:19:14,705 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.RotationMask" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/AirMaskWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..anat..sub-03_T1w.nii.gz/RotationMask".
250730-23:19:14,709 nipype.workflow INFO:
[Node] Executing "RotationMask" <mriqc.interfaces.anatomical.RotationMask>
250730-23:19:16,329 nipype.workflow INFO:
[Node] Finished "RotationMask", elapsed time 1.6178919999999999s.
250730-23:19:16,664 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.ReportsWorkflow.PlotMosaicNoise" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..anat..sub-03_T1w.nii.gz/PlotMosaicNoise".
250730-23:19:16,668 nipype.workflow INFO:
[Node] Executing "PlotMosaicNoise" <mriqc.interfaces.viz.PlotMosaic>
250730-23:19:30,941 nipype.workflow INFO:
[Node] Finished "PlotMosaicNoise", elapsed time 18.193028s.
250730-23:19:32,753 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.motion_correct" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/fMRI_HMC/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-1_bold.nii.gz/motion_correct".
250730-23:19:32,759 nipype.workflow INFO:
[Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
250730-23:19:36,462 nipype.workflow INFO:
[Node] Finished "PlotMosaicNoise", elapsed time 23.717304s.
250730-23:19:36,725 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.SpikesMask" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-1_bold.nii.gz/SpikesMask".
250730-23:19:36,728 nipype.workflow INFO:
[Node] Executing "SpikesMask" <nipype.interfaces.utility.wrappers.Function>
250730-23:19:36,985 nipype.workflow INFO:
[Node] Finished "pre_clip", elapsed time 24.233182s.
250730-23:19:37,996 nipype.workflow INFO:
[Node] Finished "PlotMosaicNoise", elapsed time 21.327280000000002s.
250730-23:19:38,707 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.motion_correct" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/fMRI_HMC/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-2_bold.nii.gz/motion_correct".
250730-23:19:38,709 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.SpikesMask" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-2_bold.nii.gz/SpikesMask".
250730-23:19:38,714 nipype.workflow INFO:
[Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
250730-23:19:38,714 nipype.workflow INFO:
[Node] Executing "SpikesMask" <nipype.interfaces.utility.wrappers.Function>
250730-23:19:39,485 nipype.workflow INFO:
[Node] Finished "pre_clip", elapsed time 28.800218s.
250730-23:19:40,792 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.motion_correct" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/fMRI_HMC/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-1_bold.nii.gz/motion_correct".
250730-23:19:40,797 nipype.workflow INFO:
[Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
250730-23:19:42,842 nipype.workflow INFO:
[Node] Finished "SpikesMask", elapsed time 6.112096s.
250730-23:19:43,720 nipype.workflow INFO:
[Node] Finished "pre_clip", elapsed time 30.975365s.
250730-23:19:44,756 nipype.workflow INFO:
[Node] Finished "SpikesMask", elapsed time 6.039885s.
250730-23:19:44,812 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.SpikesMask" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-1_bold.nii.gz/SpikesMask".
250730-23:19:44,815 nipype.workflow INFO:
[Node] Executing "SpikesMask" <nipype.interfaces.utility.wrappers.Function>
250730-23:19:44,816 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.motion_correct" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/fMRI_HMC/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-2_bold.nii.gz/motion_correct".
250730-23:19:44,819 nipype.workflow INFO:
[Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
250730-23:19:46,956 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.SpikesMask" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-2_bold.nii.gz/SpikesMask".
250730-23:19:46,960 nipype.workflow INFO:
[Node] Executing "SpikesMask" <nipype.interfaces.utility.wrappers.Function>
250730-23:19:51,238 nipype.workflow INFO:
[Node] Finished "SpikesMask", elapsed time 6.421391s.
250730-23:19:51,422 nipype.workflow INFO:
[Node] Finished "SpikesMask", elapsed time 4.460707s.
250730-23:19:52,774 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.motion_correct" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/fMRI_HMC/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-1_bold.nii.gz/motion_correct".
250730-23:19:52,776 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.SpikesMask" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-1_bold.nii.gz/SpikesMask".
250730-23:19:52,779 nipype.workflow INFO:
[Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
250730-23:19:52,782 nipype.workflow INFO:
[Node] Executing "SpikesMask" <nipype.interfaces.utility.wrappers.Function>
250730-23:19:57,621 nipype.workflow INFO:
[Node] Finished "SpikesMask", elapsed time 4.836816s.
250730-23:19:58,824 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.motion_correct" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/fMRI_HMC/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-2_bold.nii.gz/motion_correct".
250730-23:19:58,827 nipype.workflow INFO:
[Node] Executing "motion_correct" <nipype.interfaces.afni.preprocess.Volreg>
250730-23:21:57,252 nipype.workflow INFO:
[Node] Finished "motion_correct", elapsed time 136.450958s.
250730-23:21:59,158 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.SpikesMask" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-2_bold.nii.gz/SpikesMask".
250730-23:21:59,165 nipype.workflow INFO:
[Node] Executing "SpikesMask" <nipype.interfaces.utility.wrappers.Function>
250730-23:22:02,29 nipype.workflow INFO:
[Node] Finished "motion_correct", elapsed time 149.269127s.
250730-23:22:02,432 nipype.workflow INFO:
[Node] Finished "SpikesMask", elapsed time 3.26552s.
250730-23:22:02,587 nipype.workflow INFO:
[Node] Finished "motion_correct", elapsed time 143.870439s.
250730-23:22:03,78 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_n4" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/synthstrip_wf/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..anat..sub-02_T1w.nii.gz/pre_n4".
250730-23:22:03,78 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_n4" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/synthstrip_wf/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..anat..sub-01_T1w.nii.gz/pre_n4".
250730-23:22:03,80 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.pre_n4" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/synthstrip_wf/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..anat..sub-03_T1w.nii.gz/pre_n4".
250730-23:22:03,83 nipype.workflow INFO:
[Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
250730-23:22:03,86 nipype.workflow INFO:
[Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
250730-23:22:03,90 nipype.workflow INFO:
[Node] Executing "pre_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
250730-23:22:10,54 nipype.workflow INFO:
[Node] Finished "motion_correct", elapsed time 145.233648s.
250730-23:22:11,116 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/fMRI_HMC/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-1_bold.nii.gz/ComputeFD".
250730-23:22:11,119 nipype.workflow INFO:
[Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
250730-23:22:11,126 nipype.workflow INFO:
[Node] Finished "ComputeFD", elapsed time 0.006364s.
250730-23:22:13,155 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.mean" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-1_bold.nii.gz/mean".
250730-23:22:13,158 nipype.workflow INFO:
[Node] Executing "mean" <nipype.interfaces.afni.utils.TStat>
250730-23:22:14,404 nipype.workflow INFO:
[Node] Finished "mean", elapsed time 1.244556s.
250730-23:22:15,262 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.compute_tsnr" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-1_bold.nii.gz/compute_tsnr".
250730-23:22:15,267 nipype.workflow INFO:
[Node] Executing "compute_tsnr" <nipype.algorithms.confounds.TSNR>
250730-23:22:16,726 nipype.workflow INFO:
[Node] Finished "compute_tsnr", elapsed time 1.456938s.
250730-23:22:17,212 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ComputeIQMs.quality" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-1_bold.nii.gz/quality".
250730-23:22:17,215 nipype.workflow INFO:
[Node] Executing "quality" <nipype.interfaces.afni.preprocess.QualityIndex>
250730-23:22:19,967 nipype.workflow INFO:
[Node] Finished "quality", elapsed time 2.751367s.
250730-23:22:21,145 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.SpikesFinderBgMask" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-1_bold.nii.gz/SpikesFinderBgMask".
250730-23:22:21,150 nipype.workflow INFO:
[Node] Executing "SpikesFinderBgMask" <mriqc.interfaces.functional.Spikes>
250730-23:22:21,760 nipype.workflow INFO:
[Node] Finished "SpikesFinderBgMask", elapsed time 0.607993s.
250730-23:22:23,269 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/fMRI_HMC/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-2_bold.nii.gz/ComputeFD".
250730-23:22:23,274 nipype.workflow INFO:
[Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
250730-23:22:23,280 nipype.workflow INFO:
[Node] Finished "ComputeFD", elapsed time 0.004981s.
250730-23:22:25,234 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.mean" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-2_bold.nii.gz/mean".
250730-23:22:25,240 nipype.workflow INFO:
[Node] Executing "mean" <nipype.interfaces.afni.utils.TStat>
250730-23:22:26,946 nipype.workflow INFO:
[Node] Finished "mean", elapsed time 1.704377s.
250730-23:22:28,230 nipype.workflow INFO:
[Node] Finished "motion_correct", elapsed time 155.449535s.
250730-23:22:29,242 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ComputeIQMs.quality" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-2_bold.nii.gz/quality".
250730-23:22:29,242 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.compute_tsnr" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-2_bold.nii.gz/compute_tsnr".
250730-23:22:29,248 nipype.workflow INFO:
[Node] Executing "quality" <nipype.interfaces.afni.preprocess.QualityIndex>
250730-23:22:29,249 nipype.workflow INFO:
[Node] Executing "compute_tsnr" <nipype.algorithms.confounds.TSNR>
250730-23:22:30,384 nipype.workflow INFO:
[Node] Finished "compute_tsnr", elapsed time 1.133272s.
250730-23:22:31,332 nipype.workflow INFO:
[Node] Finished "motion_correct", elapsed time 152.503749s.
250730-23:22:31,382 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.SpikesFinderBgMask" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-2_bold.nii.gz/SpikesFinderBgMask".
250730-23:22:31,386 nipype.workflow INFO:
[Node] Executing "SpikesFinderBgMask" <mriqc.interfaces.functional.Spikes>
250730-23:22:31,529 nipype.workflow INFO:
[Node] Finished "quality", elapsed time 2.279173s.
250730-23:22:32,197 nipype.workflow INFO:
[Node] Finished "SpikesFinderBgMask", elapsed time 0.809492s.
250730-23:22:33,228 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/fMRI_HMC/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-1_bold.nii.gz/ComputeFD".
250730-23:22:33,230 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.mean" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-1_bold.nii.gz/mean".
250730-23:22:33,230 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.compute_tsnr" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-1_bold.nii.gz/compute_tsnr".
250730-23:22:33,231 nipype.workflow INFO:
[Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
250730-23:22:33,233 nipype.workflow INFO:
[Node] Executing "compute_tsnr" <nipype.algorithms.confounds.TSNR>
250730-23:22:33,233 nipype.workflow INFO:
[Node] Executing "mean" <nipype.interfaces.afni.utils.TStat>
250730-23:22:33,236 nipype.workflow INFO:
[Node] Finished "ComputeFD", elapsed time 0.003465s.
250730-23:22:34,481 nipype.workflow INFO:
[Node] Finished "compute_tsnr", elapsed time 1.24694s.
250730-23:22:34,989 nipype.workflow INFO:
[Node] Finished "mean", elapsed time 1.7548629999999998s.
250730-23:22:35,345 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ComputeIQMs.quality" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-1_bold.nii.gz/quality".
250730-23:22:35,348 nipype.workflow INFO:
[Node] Executing "quality" <nipype.interfaces.afni.preprocess.QualityIndex>
250730-23:22:35,350 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.SpikesFinderBgMask" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-1_bold.nii.gz/SpikesFinderBgMask".
250730-23:22:35,360 nipype.workflow INFO:
[Node] Executing "SpikesFinderBgMask" <mriqc.interfaces.functional.Spikes>
250730-23:22:36,597 nipype.workflow INFO:
[Node] Finished "SpikesFinderBgMask", elapsed time 1.232503s.
250730-23:22:37,258 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/fMRI_HMC/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-2_bold.nii.gz/ComputeFD".
250730-23:22:37,261 nipype.workflow INFO:
[Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
250730-23:22:37,265 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.mean" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-2_bold.nii.gz/mean".
250730-23:22:37,267 nipype.workflow INFO:
[Node] Executing "mean" <nipype.interfaces.afni.utils.TStat>
250730-23:22:37,278 nipype.workflow INFO:
[Node] Finished "ComputeFD", elapsed time 0.01572s.
250730-23:22:38,409 nipype.workflow INFO:
[Node] Finished "mean", elapsed time 1.141041s.
250730-23:22:39,432 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.compute_tsnr" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-2_bold.nii.gz/compute_tsnr".
250730-23:22:39,437 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ComputeIQMs.quality" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-2_bold.nii.gz/quality".
250730-23:22:39,464 nipype.workflow INFO:
[Node] Executing "quality" <nipype.interfaces.afni.preprocess.QualityIndex>
250730-23:22:39,486 nipype.workflow INFO:
[Node] Executing "compute_tsnr" <nipype.algorithms.confounds.TSNR>
250730-23:22:39,524 nipype.workflow INFO:
[Node] Finished "quality", elapsed time 4.174809s.
250730-23:22:40,473 nipype.workflow INFO:
[Node] Finished "compute_tsnr", elapsed time 0.985841s.
250730-23:22:41,330 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.SpikesFinderBgMask" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-2_bold.nii.gz/SpikesFinderBgMask".
250730-23:22:41,336 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/fMRI_HMC/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-1_bold.nii.gz/ComputeFD".
250730-23:22:41,339 nipype.workflow INFO:
[Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
250730-23:22:41,343 nipype.workflow INFO:
[Node] Finished "ComputeFD", elapsed time 0.003197s.
250730-23:22:41,351 nipype.workflow INFO:
[Node] Executing "SpikesFinderBgMask" <mriqc.interfaces.functional.Spikes>
250730-23:22:41,467 nipype.workflow INFO:
[Node] Finished "quality", elapsed time 2.001831s.
250730-23:22:42,85 nipype.workflow INFO:
[Node] Finished "SpikesFinderBgMask", elapsed time 0.732858s.
250730-23:22:43,356 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.mean" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-1_bold.nii.gz/mean".
250730-23:22:43,359 nipype.workflow INFO:
[Node] Executing "mean" <nipype.interfaces.afni.utils.TStat>
250730-23:22:43,360 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.compute_tsnr" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-1_bold.nii.gz/compute_tsnr".
250730-23:22:43,364 nipype.workflow INFO:
[Node] Executing "compute_tsnr" <nipype.algorithms.confounds.TSNR>
250730-23:22:43,368 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ComputeIQMs.quality" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-1_bold.nii.gz/quality".
250730-23:22:43,372 nipype.workflow INFO:
[Node] Executing "quality" <nipype.interfaces.afni.preprocess.QualityIndex>
250730-23:22:44,559 nipype.workflow INFO:
[Node] Finished "compute_tsnr", elapsed time 1.193921s.
250730-23:22:45,372 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.SpikesFinderBgMask" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-1_bold.nii.gz/SpikesFinderBgMask".
250730-23:22:45,377 nipype.workflow INFO:
[Node] Executing "SpikesFinderBgMask" <mriqc.interfaces.functional.Spikes>
250730-23:22:46,184 nipype.workflow INFO:
[Node] Finished "mean", elapsed time 2.823288s.
250730-23:22:46,228 nipype.workflow INFO:
[Node] Finished "SpikesFinderBgMask", elapsed time 0.850058s.
250730-23:22:46,526 nipype.workflow INFO:
[Node] Finished "quality", elapsed time 3.152716s.
250730-23:22:47,297 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.fMRI_HMC.ComputeFD" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/fMRI_HMC/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-2_bold.nii.gz/ComputeFD".
250730-23:22:47,298 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.mean" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-2_bold.nii.gz/mean".
250730-23:22:47,300 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.compute_tsnr" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-2_bold.nii.gz/compute_tsnr".
250730-23:22:47,301 nipype.workflow INFO:
[Node] Executing "mean" <nipype.interfaces.afni.utils.TStat>
250730-23:22:47,302 nipype.workflow INFO:
[Node] Executing "ComputeFD" <nipype.algorithms.confounds.FramewiseDisplacement>
250730-23:22:47,303 nipype.workflow INFO:
[Node] Executing "compute_tsnr" <nipype.algorithms.confounds.TSNR>
250730-23:22:47,322 nipype.workflow INFO:
[Node] Finished "ComputeFD", elapsed time 0.018206s.
250730-23:22:48,355 nipype.workflow INFO:
[Node] Finished "compute_tsnr", elapsed time 1.051094s.
250730-23:22:48,999 nipype.workflow INFO:
[Node] Finished "mean", elapsed time 1.696385s.
250730-23:22:49,292 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ComputeIQMs.quality" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-2_bold.nii.gz/quality".
250730-23:22:49,294 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.SpikesFinderBgMask" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-2_bold.nii.gz/SpikesFinderBgMask".
250730-23:22:49,296 nipype.workflow INFO:
[Node] Executing "quality" <nipype.interfaces.afni.preprocess.QualityIndex>
250730-23:22:49,297 nipype.workflow INFO:
[Node] Executing "SpikesFinderBgMask" <mriqc.interfaces.functional.Spikes>
250730-23:22:50,36 nipype.workflow INFO:
[Node] Finished "SpikesFinderBgMask", elapsed time 0.737923s.
250730-23:22:51,421 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.fMRIBrainMask.afni_msk" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/fMRIBrainMask/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-1_bold.nii.gz/afni_msk".
250730-23:22:51,424 nipype.workflow INFO:
[Node] Executing "afni_msk" <nipype.interfaces.afni.preprocess.Automask>
250730-23:22:51,424 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/SpatialNormalization/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-1_bold.nii.gz/SharpenEPI".
250730-23:22:51,429 nipype.workflow INFO:
[Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
250730-23:22:52,342 nipype.workflow INFO:
[Node] Finished "afni_msk", elapsed time 0.916783s.
250730-23:22:52,542 nipype.workflow INFO:
[Node] Finished "quality", elapsed time 3.24387s.
250730-23:22:53,367 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.PlotMosaicMean" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-1_bold.nii.gz/PlotMosaicMean".
250730-23:22:53,369 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.PlotMosaicNoise" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-1_bold.nii.gz/PlotMosaicNoise".
250730-23:22:53,370 nipype.workflow INFO:
[Node] Executing "PlotMosaicMean" <mriqc.interfaces.viz.PlotMosaic>
250730-23:22:53,373 nipype.workflow INFO:
[Node] Executing "PlotMosaicNoise" <mriqc.interfaces.viz.PlotMosaic>
250730-23:22:59,877 nipype.workflow INFO:
[Node] Finished "SharpenEPI", elapsed time 7.374776s.
250730-23:23:01,230 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.PlotMosaicSD" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-1_bold.nii.gz/PlotMosaicSD".
250730-23:23:01,233 nipype.workflow INFO:
[Node] Executing "PlotMosaicSD" <mriqc.interfaces.viz.PlotMosaic>
250730-23:23:01,492 nipype.workflow INFO:
[Node] Finished "PlotMosaicMean", elapsed time 8.121364s.
250730-23:23:02,44 nipype.workflow INFO:
[Node] Finished "PlotMosaicNoise", elapsed time 8.669917s.
250730-23:23:02,430 nipype.workflow INFO:
[Node] Finished "pre_n4", elapsed time 58.857574s.
250730-23:23:03,16 nipype.workflow INFO:
[Node] Finished "pre_n4", elapsed time 59.61115s.
250730-23:23:03,244 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.synthstrip" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/synthstrip_wf/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..anat..sub-01_T1w.nii.gz/synthstrip".
250730-23:23:03,244 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.synthstrip" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/synthstrip_wf/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..anat..sub-02_T1w.nii.gz/synthstrip".
250730-23:23:03,247 nipype.workflow INFO:
[Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
250730-23:23:03,248 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.fMRIBrainMask.afni_msk" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/fMRIBrainMask/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-2_bold.nii.gz/afni_msk".
250730-23:23:03,249 nipype.workflow INFO:
[Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
250730-23:23:03,252 nipype.workflow INFO:
[Node] Executing "afni_msk" <nipype.interfaces.afni.preprocess.Automask>
250730-23:23:03,252 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/SpatialNormalization/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-2_bold.nii.gz/SharpenEPI".
250730-23:23:03,255 nipype.workflow INFO:
[Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
250730-23:23:03,867 nipype.workflow INFO:
[Node] Finished "pre_n4", elapsed time 60.435695s.
250730-23:23:03,985 nipype.workflow INFO:
[Node] Finished "afni_msk", elapsed time 0.732036s.
250730-23:23:05,253 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.synthstrip" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/synthstrip_wf/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..anat..sub-03_T1w.nii.gz/synthstrip".
250730-23:23:05,254 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.PlotMosaicMean" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-2_bold.nii.gz/PlotMosaicMean".
250730-23:23:05,258 nipype.workflow INFO:
[Node] Executing "synthstrip" <mriqc.interfaces.synthstrip.SynthStrip>
250730-23:23:05,260 nipype.workflow INFO:
[Node] Executing "PlotMosaicMean" <mriqc.interfaces.viz.PlotMosaic>
250730-23:23:06,189 nipype.workflow INFO:
[Node] Finished "SharpenEPI", elapsed time 2.932871s.
250730-23:23:06,638 nipype.workflow INFO:
[Node] Finished "PlotMosaicSD", elapsed time 5.403989s.
250730-23:23:07,228 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.PlotMosaicNoise" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-2_bold.nii.gz/PlotMosaicNoise".
250730-23:23:07,228 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.PlotMosaicSD" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-2_bold.nii.gz/PlotMosaicSD".
250730-23:23:07,231 nipype.workflow INFO:
[Node] Executing "PlotMosaicSD" <mriqc.interfaces.viz.PlotMosaic>
250730-23:23:07,234 nipype.workflow INFO:
[Node] Executing "PlotMosaicNoise" <mriqc.interfaces.viz.PlotMosaic>
250730-23:23:10,848 nipype.workflow INFO:
[Node] Finished "PlotMosaicMean", elapsed time 5.586977s.
250730-23:23:11,314 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.fMRIBrainMask.afni_msk" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/fMRIBrainMask/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-1_bold.nii.gz/afni_msk".
250730-23:23:11,317 nipype.workflow INFO:
[Node] Executing "afni_msk" <nipype.interfaces.afni.preprocess.Automask>
250730-23:23:12,172 nipype.workflow INFO:
[Node] Finished "afni_msk", elapsed time 0.853701s.
250730-23:23:12,729 nipype.workflow INFO:
[Node] Finished "PlotMosaicNoise", elapsed time 5.493237s.
250730-23:23:12,813 nipype.workflow INFO:
[Node] Finished "PlotMosaicSD", elapsed time 5.580445s.
250730-23:23:13,259 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/SpatialNormalization/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-1_bold.nii.gz/SharpenEPI".
250730-23:23:13,264 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.PlotMosaicMean" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-1_bold.nii.gz/PlotMosaicMean".
250730-23:23:13,264 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.PlotMosaicNoise" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-1_bold.nii.gz/PlotMosaicNoise".
250730-23:23:13,267 nipype.workflow INFO:
[Node] Executing "PlotMosaicMean" <mriqc.interfaces.viz.PlotMosaic>
250730-23:23:13,267 nipype.workflow INFO:
[Node] Executing "PlotMosaicNoise" <mriqc.interfaces.viz.PlotMosaic>
250730-23:23:13,268 nipype.workflow INFO:
[Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
250730-23:23:16,377 nipype.workflow INFO:
[Node] Finished "SharpenEPI", elapsed time 3.106573s.
250730-23:23:17,225 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.PlotMosaicSD" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-1_bold.nii.gz/PlotMosaicSD".
250730-23:23:17,228 nipype.workflow INFO:
[Node] Executing "PlotMosaicSD" <mriqc.interfaces.viz.PlotMosaic>
250730-23:23:18,727 nipype.workflow INFO:
[Node] Finished "PlotMosaicMean", elapsed time 5.459859s.
250730-23:23:19,75 nipype.workflow INFO:
[Node] Finished "PlotMosaicNoise", elapsed time 5.807577s.
250730-23:23:19,288 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.fMRIBrainMask.afni_msk" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/fMRIBrainMask/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-2_bold.nii.gz/afni_msk".
250730-23:23:19,291 nipype.workflow INFO:
[Node] Executing "afni_msk" <nipype.interfaces.afni.preprocess.Automask>
250730-23:23:19,772 nipype.workflow INFO:
[Node] Finished "afni_msk", elapsed time 0.480105s.
250730-23:23:21,247 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/SpatialNormalization/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-2_bold.nii.gz/SharpenEPI".
250730-23:23:21,247 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.PlotMosaicMean" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-2_bold.nii.gz/PlotMosaicMean".
250730-23:23:21,249 nipype.workflow INFO:
[Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
250730-23:23:21,249 nipype.workflow INFO:
[Node] Executing "PlotMosaicMean" <mriqc.interfaces.viz.PlotMosaic>
250730-23:23:22,450 nipype.workflow INFO:
[Node] Finished "PlotMosaicSD", elapsed time 5.220086s.
250730-23:23:23,308 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.PlotMosaicNoise" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-2_bold.nii.gz/PlotMosaicNoise".
250730-23:23:23,311 nipype.workflow INFO:
[Node] Executing "PlotMosaicNoise" <mriqc.interfaces.viz.PlotMosaic>
250730-23:23:26,134 nipype.workflow INFO:
[Node] Finished "SharpenEPI", elapsed time 4.883135s.
250730-23:23:26,758 nipype.workflow INFO:
[Node] Finished "PlotMosaicMean", elapsed time 5.507589s.
250730-23:23:27,220 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.PlotMosaicSD" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-2_bold.nii.gz/PlotMosaicSD".
250730-23:23:27,223 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.fMRIBrainMask.afni_msk" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/fMRIBrainMask/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-1_bold.nii.gz/afni_msk".
250730-23:23:27,223 nipype.workflow INFO:
[Node] Executing "PlotMosaicSD" <mriqc.interfaces.viz.PlotMosaic>
250730-23:23:27,227 nipype.workflow INFO:
[Node] Executing "afni_msk" <nipype.interfaces.afni.preprocess.Automask>
250730-23:23:27,714 nipype.workflow INFO:
[Node] Finished "afni_msk", elapsed time 0.485006s.
250730-23:23:29,191 nipype.workflow INFO:
[Node] Finished "PlotMosaicNoise", elapsed time 5.87912s.
250730-23:23:29,261 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/SpatialNormalization/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-1_bold.nii.gz/SharpenEPI".
250730-23:23:29,266 nipype.workflow INFO:
[Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
250730-23:23:31,376 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.PlotMosaicMean" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-1_bold.nii.gz/PlotMosaicMean".
250730-23:23:31,378 nipype.workflow INFO:
[Node] Executing "PlotMosaicMean" <mriqc.interfaces.viz.PlotMosaic>
250730-23:23:33,509 nipype.workflow INFO:
[Node] Finished "PlotMosaicSD", elapsed time 6.284454s.
250730-23:23:33,681 nipype.workflow INFO:
[Node] Finished "SharpenEPI", elapsed time 4.413183s.
250730-23:23:35,336 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.PlotMosaicNoise" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-1_bold.nii.gz/PlotMosaicNoise".
250730-23:23:35,338 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.PlotMosaicSD" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-1_bold.nii.gz/PlotMosaicSD".
250730-23:23:35,339 nipype.workflow INFO:
[Node] Executing "PlotMosaicNoise" <mriqc.interfaces.viz.PlotMosaic>
250730-23:23:35,342 nipype.workflow INFO:
[Node] Executing "PlotMosaicSD" <mriqc.interfaces.viz.PlotMosaic>
250730-23:23:37,83 nipype.workflow INFO:
[Node] Finished "PlotMosaicMean", elapsed time 5.703975s.
250730-23:23:39,305 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.fMRIBrainMask.afni_msk" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/fMRIBrainMask/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-2_bold.nii.gz/afni_msk".
250730-23:23:39,310 nipype.workflow INFO:
[Node] Executing "afni_msk" <nipype.interfaces.afni.preprocess.Automask>
250730-23:23:40,614 nipype.workflow INFO:
[Node] Finished "afni_msk", elapsed time 1.301763s.
250730-23:23:40,981 nipype.workflow INFO:
[Node] Finished "PlotMosaicSD", elapsed time 5.637757s.
250730-23:23:41,324 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.SharpenEPI" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/SpatialNormalization/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-2_bold.nii.gz/SharpenEPI".
250730-23:23:41,324 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.PlotMosaicMean" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-2_bold.nii.gz/PlotMosaicMean".
250730-23:23:41,327 nipype.workflow INFO:
[Node] Executing "PlotMosaicMean" <mriqc.interfaces.viz.PlotMosaic>
250730-23:23:41,334 nipype.workflow INFO:
[Node] Executing "SharpenEPI" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
250730-23:23:41,582 nipype.workflow INFO:
[Node] Finished "PlotMosaicNoise", elapsed time 6.239272s.
250730-23:23:43,344 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.PlotMosaicNoise" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-2_bold.nii.gz/PlotMosaicNoise".
250730-23:23:43,346 nipype.workflow INFO:
[Node] Executing "PlotMosaicNoise" <mriqc.interfaces.viz.PlotMosaic>
250730-23:23:45,589 nipype.workflow INFO:
[Node] Finished "SharpenEPI", elapsed time 4.253315s.
250730-23:23:47,355 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.PlotMosaicSD" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-2_bold.nii.gz/PlotMosaicSD".
250730-23:23:47,358 nipype.workflow INFO:
[Node] Executing "PlotMosaicSD" <mriqc.interfaces.viz.PlotMosaic>
250730-23:23:49,111 nipype.workflow INFO:
[Node] Finished "PlotMosaicMean", elapsed time 7.782237s.
250730-23:23:50,749 nipype.workflow INFO:
[Node] Finished "PlotMosaicNoise", elapsed time 7.4018180000000005s.
250730-23:23:51,362 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ComputeIQMs.ComputeDVARS" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-1_bold.nii.gz/ComputeDVARS".
250730-23:23:51,365 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ComputeIQMs.smoothness" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-1_bold.nii.gz/smoothness".
250730-23:23:51,369 nipype.workflow INFO:
[Node] Executing "smoothness" <nipype.interfaces.afni.utils.FWHMx>
250730-23:23:51,369 nipype.workflow INFO:
[Node] Executing "ComputeDVARS" <nipype.algorithms.confounds.ComputeDVARS>
250730-23:23:54,78 nipype.workflow INFO:
[Node] Finished "PlotMosaicSD", elapsed time 6.719323s.
250730-23:23:54,121 nipype.workflow INFO:
[Node] Finished "smoothness", elapsed time 2.751436s.
250730-23:23:55,324 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ComputeIQMs.outliers" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-1_bold.nii.gz/outliers".
250730-23:23:55,328 nipype.workflow INFO:
[Node] Executing "outliers" <nipype.interfaces.afni.preprocess.OutlierCount>
250730-23:23:55,328 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ComputeIQMs.gcor" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-1_bold.nii.gz/gcor".
250730-23:23:55,333 nipype.workflow INFO:
[Node] Executing "gcor" <mriqc.interfaces.transitional.GCOR>
250730-23:23:57,571 nipype.workflow INFO:
[Node] Finished "outliers", elapsed time 2.242173s.
250730-23:23:59,101 nipype.workflow INFO:
[Node] Finished "gcor", elapsed time 3.767059s.
250730-23:23:59,392 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.dilated_mask" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-1_bold.nii.gz/dilated_mask".
250730-23:23:59,396 nipype.workflow INFO:
[Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
250730-23:23:59,407 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.PlotBrainmask" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-1_bold.nii.gz/PlotBrainmask".
250730-23:23:59,412 nipype.workflow INFO:
[Node] Executing "PlotBrainmask" <mriqc.interfaces.viz.PlotContours>
250730-23:24:00,109 nipype.workflow INFO:
[Node] Finished "ComputeDVARS", elapsed time 8.738703s.
250730-23:24:00,353 nipype.workflow INFO:
[Node] Finished "dilated_mask", elapsed time 0.955426s.
250730-23:24:01,340 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.PlotMosaicZoomed" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-1_bold.nii.gz/PlotMosaicZoomed".
250730-23:24:01,344 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/SpatialNormalization/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-1_bold.nii.gz/EPI2MNI".
250730-23:24:01,348 nipype.workflow INFO:
[Node] Executing "PlotMosaicZoomed" <mriqc.interfaces.viz.PlotMosaic>
250730-23:24:01,349 nipype.workflow INFO:
[Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
250730-23:24:07,980 nipype.workflow INFO:
[Node] Finished "PlotMosaicZoomed", elapsed time 6.631007s.
250730-23:24:08,297 nipype.workflow INFO:
[Node] Finished "PlotBrainmask", elapsed time 8.883455s.
250730-23:24:09,380 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ComputeIQMs.ComputeDVARS" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-2_bold.nii.gz/ComputeDVARS".
250730-23:24:09,380 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ComputeIQMs.smoothness" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-2_bold.nii.gz/smoothness".
250730-23:24:09,384 nipype.workflow INFO:
[Node] Executing "smoothness" <nipype.interfaces.afni.utils.FWHMx>
250730-23:24:09,384 nipype.workflow INFO:
[Node] Executing "ComputeDVARS" <nipype.algorithms.confounds.ComputeDVARS>
250730-23:24:11,741 nipype.workflow INFO:
[Node] Finished "smoothness", elapsed time 2.355767s.
250730-23:24:13,469 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ComputeIQMs.outliers" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-2_bold.nii.gz/outliers".
250730-23:24:13,477 nipype.workflow INFO:
[Node] Executing "outliers" <nipype.interfaces.afni.preprocess.OutlierCount>
250730-23:24:16,85 nipype.workflow INFO:
[Node] Finished "outliers", elapsed time 2.606586s.
250730-23:24:17,410 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ComputeIQMs.gcor" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-2_bold.nii.gz/gcor".
250730-23:24:17,414 nipype.workflow INFO:
[Node] Executing "gcor" <mriqc.interfaces.transitional.GCOR>
250730-23:24:17,511 nipype.workflow INFO:
[Node] Finished "ComputeDVARS", elapsed time 8.125769s.
250730-23:24:19,429 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.dilated_mask" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-2_bold.nii.gz/dilated_mask".
250730-23:24:19,431 nipype.workflow INFO:
[Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
250730-23:24:19,467 nipype.workflow INFO:
[Node] Finished "dilated_mask", elapsed time 0.035263s.
250730-23:24:20,858 nipype.workflow INFO:
[Node] Finished "gcor", elapsed time 3.442389s.
250730-23:24:21,391 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.PlotBrainmask" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-2_bold.nii.gz/PlotBrainmask".
250730-23:24:21,393 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.PlotMosaicZoomed" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-2_bold.nii.gz/PlotMosaicZoomed".
250730-23:24:21,395 nipype.workflow INFO:
[Node] Executing "PlotBrainmask" <mriqc.interfaces.viz.PlotContours>
250730-23:24:21,399 nipype.workflow INFO:
[Node] Executing "PlotMosaicZoomed" <mriqc.interfaces.viz.PlotMosaic>
250730-23:24:24,640 nipype.workflow INFO:
[Node] Finished "synthstrip", elapsed time 81.389677s.
250730-23:24:25,404 nipype.workflow INFO:
[Node] Finished "synthstrip", elapsed time 82.156025s.
250730-23:24:25,438 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.post_n4" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/synthstrip_wf/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..anat..sub-02_T1w.nii.gz/post_n4".
250730-23:24:25,441 nipype.workflow INFO:
[Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
250730-23:24:25,734 nipype.workflow INFO:
[Node] Finished "PlotBrainmask", elapsed time 4.338428s.
250730-23:24:27,396 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.post_n4" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/synthstrip_wf/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..anat..sub-01_T1w.nii.gz/post_n4".
250730-23:24:27,397 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.smoothness" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..anat..sub-01_T1w.nii.gz/smoothness".
250730-23:24:27,400 nipype.workflow INFO:
[Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
250730-23:24:27,402 nipype.workflow INFO:
[Node] Executing "smoothness" <nipype.interfaces.afni.utils.FWHMx>
250730-23:24:27,717 nipype.workflow INFO:
[Node] Finished "synthstrip", elapsed time 82.45748s.
250730-23:24:27,721 nipype.workflow INFO:
[Node] Finished "PlotMosaicZoomed", elapsed time 6.320943s.
250730-23:24:29,437 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.ReportsWorkflow.PlotMosaicZoomed" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..anat..sub-01_T1w.nii.gz/PlotMosaicZoomed".
250730-23:24:29,438 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.ReportsWorkflow.PlotBrainmask" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..anat..sub-01_T1w.nii.gz/PlotBrainmask".
250730-23:24:29,441 nipype.workflow INFO:
[Node] Executing "PlotBrainmask" <mriqc.interfaces.viz.PlotContours>
250730-23:24:29,445 nipype.workflow INFO:
[Node] Executing "PlotMosaicZoomed" <mriqc.interfaces.viz.PlotMosaic>
250730-23:24:40,206 nipype.workflow INFO:
[Node] Finished "PlotBrainmask", elapsed time 10.763453s.
250730-23:24:40,958 nipype.workflow INFO:
[Node] Finished "smoothness", elapsed time 13.55491s.
250730-23:24:41,475 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.smoothness" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..anat..sub-02_T1w.nii.gz/smoothness".
250730-23:24:41,480 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.ReportsWorkflow.PlotMosaicZoomed" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..anat..sub-02_T1w.nii.gz/PlotMosaicZoomed".
250730-23:24:41,484 nipype.workflow INFO:
[Node] Executing "smoothness" <nipype.interfaces.afni.utils.FWHMx>
250730-23:24:41,486 nipype.workflow INFO:
[Node] Executing "PlotMosaicZoomed" <mriqc.interfaces.viz.PlotMosaic>
250730-23:24:51,453 nipype.workflow INFO:
[Node] Finished "smoothness", elapsed time 9.966157s.
250730-23:24:52,499 nipype.workflow INFO:
[Node] Finished "post_n4", elapsed time 26.355907s.
250730-23:24:53,397 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.ReportsWorkflow.PlotBrainmask" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..anat..sub-02_T1w.nii.gz/PlotBrainmask".
250730-23:24:53,400 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.post_n4" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/synthstrip_wf/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..anat..sub-03_T1w.nii.gz/post_n4".
250730-23:24:53,404 nipype.workflow INFO:
[Node] Executing "PlotBrainmask" <mriqc.interfaces.viz.PlotContours>
250730-23:24:53,409 nipype.workflow INFO:
[Node] Executing "post_n4" <nipype.interfaces.ants.segmentation.N4BiasFieldCorrection>
250730-23:24:55,506 nipype.workflow INFO:
[Node] Finished "PlotMosaicZoomed", elapsed time 26.044195s.
250730-23:24:57,457 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.smoothness" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..anat..sub-03_T1w.nii.gz/smoothness".
250730-23:24:57,463 nipype.workflow INFO:
[Node] Executing "smoothness" <nipype.interfaces.afni.utils.FWHMx>
250730-23:24:59,352 nipype.workflow INFO:
[Node] Finished "post_n4", elapsed time 31.450765s.
250730-23:25:00,906 nipype.workflow INFO:
[Node] Finished "PlotBrainmask", elapsed time 7.500487s.
250730-23:25:01,421 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.ReportsWorkflow.PlotMosaicZoomed" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..anat..sub-03_T1w.nii.gz/PlotMosaicZoomed".
250730-23:25:01,421 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.ReportsWorkflow.PlotBrainmask" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..anat..sub-03_T1w.nii.gz/PlotBrainmask".
250730-23:25:01,425 nipype.workflow INFO:
[Node] Executing "PlotBrainmask" <mriqc.interfaces.viz.PlotContours>
250730-23:25:01,429 nipype.workflow INFO:
[Node] Executing "PlotMosaicZoomed" <mriqc.interfaces.viz.PlotMosaic>
250730-23:25:04,406 nipype.workflow INFO:
[Node] Finished "PlotMosaicZoomed", elapsed time 22.918791s.
250730-23:25:05,515 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/SpatialNormalization/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-2_bold.nii.gz/EPI2MNI".
250730-23:25:05,519 nipype.workflow INFO:
[Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
250730-23:25:09,641 nipype.workflow INFO:
[Node] Finished "smoothness", elapsed time 12.176811s.
250730-23:25:09,973 nipype.workflow INFO:
[Node] Finished "PlotBrainmask", elapsed time 8.547088s.
250730-23:25:11,458 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ComputeIQMs.ComputeDVARS" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-1_bold.nii.gz/ComputeDVARS".
250730-23:25:11,460 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ComputeIQMs.smoothness" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-1_bold.nii.gz/smoothness".
250730-23:25:11,462 nipype.workflow INFO:
[Node] Executing "ComputeDVARS" <nipype.algorithms.confounds.ComputeDVARS>
250730-23:25:11,465 nipype.workflow INFO:
[Node] Executing "smoothness" <nipype.interfaces.afni.utils.FWHMx>
250730-23:25:14,85 nipype.workflow INFO:
[Node] Finished "smoothness", elapsed time 2.617651s.
250730-23:25:15,408 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ComputeIQMs.outliers" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-1_bold.nii.gz/outliers".
250730-23:25:15,413 nipype.workflow INFO:
[Node] Executing "outliers" <nipype.interfaces.afni.preprocess.OutlierCount>
250730-23:25:16,790 nipype.workflow INFO:
[Node] Finished "outliers", elapsed time 1.374399s.
250730-23:25:17,509 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ComputeIQMs.gcor" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-1_bold.nii.gz/gcor".
250730-23:25:17,514 nipype.workflow INFO:
[Node] Executing "gcor" <mriqc.interfaces.transitional.GCOR>
250730-23:25:20,447 nipype.workflow INFO:
[Node] Finished "post_n4", elapsed time 27.034974s.
250730-23:25:20,633 nipype.workflow INFO:
[Node] Finished "ComputeDVARS", elapsed time 9.170665s.
250730-23:25:21,28 nipype.workflow INFO:
[Node] Finished "gcor", elapsed time 3.511508s.
250730-23:25:21,476 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.dilated_mask" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-1_bold.nii.gz/dilated_mask".
250730-23:25:21,480 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.PlotMosaicZoomed" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-1_bold.nii.gz/PlotMosaicZoomed".
250730-23:25:21,480 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.PlotBrainmask" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-1_bold.nii.gz/PlotBrainmask".
250730-23:25:21,481 nipype.workflow INFO:
[Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
250730-23:25:21,484 nipype.workflow INFO:
[Node] Executing "PlotMosaicZoomed" <mriqc.interfaces.viz.PlotMosaic>
250730-23:25:21,490 nipype.workflow INFO:
[Node] Executing "PlotBrainmask" <mriqc.interfaces.viz.PlotContours>
250730-23:25:21,725 nipype.workflow INFO:
[Node] Finished "dilated_mask", elapsed time 0.242781s.
250730-23:25:23,444 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/SpatialNormalization/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-1_bold.nii.gz/EPI2MNI".
250730-23:25:23,448 nipype.workflow INFO:
[Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
250730-23:25:26,373 nipype.workflow INFO:
[Node] Finished "PlotMosaicZoomed", elapsed time 24.941934s.
250730-23:25:27,346 nipype.workflow INFO:
[Node] Finished "PlotMosaicZoomed", elapsed time 5.860672s.
250730-23:25:27,482 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ComputeIQMs.ComputeDVARS" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-2_bold.nii.gz/ComputeDVARS".
250730-23:25:27,488 nipype.workflow INFO:
[Node] Executing "ComputeDVARS" <nipype.algorithms.confounds.ComputeDVARS>
250730-23:25:29,628 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ComputeIQMs.smoothness" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-2_bold.nii.gz/smoothness".
250730-23:25:29,631 nipype.workflow INFO:
[Node] Executing "smoothness" <nipype.interfaces.afni.utils.FWHMx>
250730-23:25:30,823 nipype.workflow INFO:
[Node] Finished "smoothness", elapsed time 1.1912639999999999s.
250730-23:25:31,569 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ComputeIQMs.outliers" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-2_bold.nii.gz/outliers".
250730-23:25:31,573 nipype.workflow INFO:
[Node] Executing "outliers" <nipype.interfaces.afni.preprocess.OutlierCount>
250730-23:25:33,269 nipype.workflow INFO:
[Node] Finished "outliers", elapsed time 1.694953s.
250730-23:25:34,169 nipype.workflow INFO:
[Node] Finished "PlotBrainmask", elapsed time 12.677761s.
250730-23:25:35,549 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ComputeIQMs.gcor" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-2_bold.nii.gz/gcor".
250730-23:25:35,553 nipype.workflow INFO:
[Node] Executing "gcor" <mriqc.interfaces.transitional.GCOR>
250730-23:25:35,557 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.dilated_mask" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-2_bold.nii.gz/dilated_mask".
250730-23:25:35,560 nipype.workflow INFO:
[Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
250730-23:25:35,808 nipype.workflow INFO:
[Node] Finished "dilated_mask", elapsed time 0.245862s.
250730-23:25:36,413 nipype.workflow INFO:
[Node] Finished "ComputeDVARS", elapsed time 8.921753s.
250730-23:25:37,671 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.PlotBrainmask" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-2_bold.nii.gz/PlotBrainmask".
250730-23:25:37,673 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.PlotMosaicZoomed" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-2_bold.nii.gz/PlotMosaicZoomed".
250730-23:25:37,679 nipype.workflow INFO:
[Node] Executing "PlotMosaicZoomed" <mriqc.interfaces.viz.PlotMosaic>
250730-23:25:37,681 nipype.workflow INFO:
[Node] Executing "PlotBrainmask" <mriqc.interfaces.viz.PlotContours>
250730-23:25:40,563 nipype.workflow INFO:
[Node] Finished "gcor", elapsed time 5.009461s.
250730-23:25:41,601 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ComputeIQMs.ComputeDVARS" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-1_bold.nii.gz/ComputeDVARS".
250730-23:25:41,605 nipype.workflow INFO:
[Node] Executing "ComputeDVARS" <nipype.algorithms.confounds.ComputeDVARS>
250730-23:25:46,122 nipype.workflow INFO:
[Node] Finished "PlotMosaicZoomed", elapsed time 8.442595s.
250730-23:25:47,481 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ComputeIQMs.smoothness" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-1_bold.nii.gz/smoothness".
250730-23:25:47,486 nipype.workflow INFO:
[Node] Executing "smoothness" <nipype.interfaces.afni.utils.FWHMx>
250730-23:25:49,461 nipype.workflow INFO:
[Node] Finished "smoothness", elapsed time 1.9661849999999998s.
250730-23:25:51,212 nipype.workflow INFO:
[Node] Finished "PlotBrainmask", elapsed time 13.529752s.
250730-23:25:51,233 nipype.workflow INFO:
[Node] Finished "ComputeDVARS", elapsed time 9.627019s.
250730-23:25:51,506 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ComputeIQMs.outliers" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-1_bold.nii.gz/outliers".
250730-23:25:51,509 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ComputeIQMs.gcor" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-1_bold.nii.gz/gcor".
250730-23:25:51,513 nipype.workflow INFO:
[Node] Executing "outliers" <nipype.interfaces.afni.preprocess.OutlierCount>
250730-23:25:51,514 nipype.workflow INFO:
[Node] Executing "gcor" <mriqc.interfaces.transitional.GCOR>
250730-23:25:51,516 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.dilated_mask" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-1_bold.nii.gz/dilated_mask".
250730-23:25:51,520 nipype.workflow INFO:
[Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
250730-23:25:51,560 nipype.workflow INFO:
[Node] Finished "dilated_mask", elapsed time 0.03489s.
250730-23:25:53,461 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.PlotBrainmask" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-1_bold.nii.gz/PlotBrainmask".
250730-23:25:53,465 nipype.workflow INFO:
[Node] Executing "PlotBrainmask" <mriqc.interfaces.viz.PlotContours>
250730-23:25:53,876 nipype.workflow INFO:
[Node] Finished "outliers", elapsed time 2.357898s.
250730-23:25:55,506 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.PlotMosaicZoomed" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-1_bold.nii.gz/PlotMosaicZoomed".
250730-23:25:55,509 nipype.workflow INFO:
[Node] Executing "PlotMosaicZoomed" <mriqc.interfaces.viz.PlotMosaic>
250730-23:25:56,131 nipype.workflow INFO:
[Node] Finished "gcor", elapsed time 4.615977s.
250730-23:25:56,188 nipype.workflow INFO:
[Node] Finished "PlotBrainmask", elapsed time 2.7220940000000002s.
250730-23:25:57,452 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ComputeIQMs.ComputeDVARS" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-2_bold.nii.gz/ComputeDVARS".
250730-23:25:57,452 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ComputeIQMs.smoothness" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-2_bold.nii.gz/smoothness".
250730-23:25:57,456 nipype.workflow INFO:
[Node] Executing "ComputeDVARS" <nipype.algorithms.confounds.ComputeDVARS>
250730-23:25:57,458 nipype.workflow INFO:
[Node] Executing "smoothness" <nipype.interfaces.afni.utils.FWHMx>
250730-23:25:58,605 nipype.workflow INFO:
[Node] Finished "smoothness", elapsed time 1.145081s.
250730-23:25:59,548 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ComputeIQMs.outliers" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-2_bold.nii.gz/outliers".
250730-23:25:59,552 nipype.workflow INFO:
[Node] Executing "outliers" <nipype.interfaces.afni.preprocess.OutlierCount>
250730-23:26:01,218 nipype.workflow INFO:
[Node] Finished "outliers", elapsed time 1.665343s.
250730-23:26:01,590 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ComputeIQMs.gcor" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-2_bold.nii.gz/gcor".
250730-23:26:01,594 nipype.workflow INFO:
[Node] Executing "gcor" <mriqc.interfaces.transitional.GCOR>
250730-23:26:03,197 nipype.workflow INFO:
[Node] Finished "PlotMosaicZoomed", elapsed time 7.687135s.
250730-23:26:03,521 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.dilated_mask" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-2_bold.nii.gz/dilated_mask".
250730-23:26:03,523 nipype.workflow INFO:
[Node] Executing "dilated_mask" <niworkflows.interfaces.morphology.BinaryDilation>
250730-23:26:03,575 nipype.workflow INFO:
[Node] Finished "dilated_mask", elapsed time 0.050206s.
250730-23:26:04,356 nipype.workflow INFO:
[Node] Finished "gcor", elapsed time 2.761252s.
250730-23:26:05,553 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.PlotBrainmask" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-2_bold.nii.gz/PlotBrainmask".
250730-23:26:05,557 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.PlotMosaicZoomed" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-2_bold.nii.gz/PlotMosaicZoomed".
250730-23:26:05,559 nipype.workflow INFO:
[Node] Executing "PlotBrainmask" <mriqc.interfaces.viz.PlotContours>
250730-23:26:05,560 nipype.workflow INFO:
[Node] Executing "PlotMosaicZoomed" <mriqc.interfaces.viz.PlotMosaic>
250730-23:26:09,89 nipype.workflow INFO:
[Node] Finished "ComputeDVARS", elapsed time 11.632694s.
250730-23:26:09,576 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_inu" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/synthstrip_wf/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..anat..sub-01_T1w.nii.gz/final_inu".
250730-23:26:09,579 nipype.workflow INFO:
[Node] Executing "final_inu" <nipype.interfaces.utility.wrappers.Function>
250730-23:26:11,575 nipype.workflow INFO:
[Node] Finished "final_inu", elapsed time 1.993102s.
250730-23:26:12,947 nipype.workflow INFO:
[Node] Finished "EPI2MNI", elapsed time 131.596314s.
250730-23:26:13,642 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/SpatialNormalization/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-2_bold.nii.gz/EPI2MNI".
250730-23:26:13,644 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_masked" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/synthstrip_wf/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..anat..sub-01_T1w.nii.gz/final_masked".
250730-23:26:13,645 nipype.workflow INFO:
[Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
250730-23:26:13,647 nipype.workflow INFO:
[Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
250730-23:26:14,689 nipype.workflow INFO:
[Node] Finished "final_masked", elapsed time 1.040642s.
250730-23:26:15,302 nipype.workflow INFO:
[Node] Finished "PlotMosaicZoomed", elapsed time 9.740612s.
250730-23:26:15,517 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.fsl_bet" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/HeadMaskWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..anat..sub-01_T1w.nii.gz/fsl_bet".
250730-23:26:15,527 nipype.workflow INFO:
[Node] Executing "fsl_bet" <nipype.interfaces.fsl.preprocess.BET>
250730-23:26:15,534 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_inu" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/synthstrip_wf/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..anat..sub-02_T1w.nii.gz/final_inu".
250730-23:26:15,550 nipype.workflow INFO:
[Node] Executing "final_inu" <nipype.interfaces.utility.wrappers.Function>
250730-23:26:17,619 nipype.workflow INFO:
[Node] Finished "final_inu", elapsed time 2.068012s.
250730-23:26:18,235 nipype.workflow INFO:
[Node] Finished "PlotBrainmask", elapsed time 12.673643s.
250730-23:26:19,741 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_masked" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/synthstrip_wf/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..anat..sub-02_T1w.nii.gz/final_masked".
250730-23:26:19,742 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.fsl_bet" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/HeadMaskWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..anat..sub-02_T1w.nii.gz/fsl_bet".
250730-23:26:19,752 nipype.workflow INFO:
[Node] Executing "fsl_bet" <nipype.interfaces.fsl.preprocess.BET>
250730-23:26:19,753 nipype.workflow INFO:
[Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
250730-23:26:20,697 nipype.workflow INFO:
[Node] Finished "final_masked", elapsed time 0.94309s.
250730-23:26:21,756 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_inu" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/synthstrip_wf/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..anat..sub-03_T1w.nii.gz/final_inu".
250730-23:26:21,772 nipype.workflow INFO:
[Node] Executing "final_inu" <nipype.interfaces.utility.wrappers.Function>
250730-23:26:24,451 nipype.workflow INFO:
[Node] Finished "final_inu", elapsed time 2.678215s.
250730-23:26:25,636 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.synthstrip_wf.final_masked" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/synthstrip_wf/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..anat..sub-03_T1w.nii.gz/final_masked".
250730-23:26:25,642 nipype.workflow INFO:
[Node] Executing "final_masked" <niworkflows.interfaces.nibabel.ApplyMask>
250730-23:26:27,327 nipype.workflow INFO:
[Node] Finished "final_masked", elapsed time 1.683345s.
250730-23:26:29,733 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.HeadMaskWorkflow.fsl_bet" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/HeadMaskWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..anat..sub-03_T1w.nii.gz/fsl_bet".
250730-23:26:29,739 nipype.workflow INFO:
[Node] Executing "fsl_bet" <nipype.interfaces.fsl.preprocess.BET>
250730-23:27:16,21 nipype.workflow INFO:
[Node] Finished "EPI2MNI", elapsed time 112.570921s.
250730-23:27:16,133 nipype.workflow INFO:
[Node] Finished "EPI2MNI", elapsed time 130.606351s.
250730-23:27:17,772 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/SpatialNormalization/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-1_bold.nii.gz/EPI2MNI".
250730-23:27:17,777 nipype.workflow INFO:
[Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
250730-23:27:17,777 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.EPI2MNI" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/SpatialNormalization/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-2_bold.nii.gz/EPI2MNI".
250730-23:27:17,784 nipype.workflow INFO:
[Node] Executing "EPI2MNI" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
250730-23:27:53,343 nipype.workflow INFO:
[Node] Finished "fsl_bet", elapsed time 93.588534s.
250730-23:27:53,777 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ComputeIQMs.measures" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-1_bold.nii.gz/measures".
250730-23:27:53,785 nipype.workflow INFO:
[Node] Executing "measures" <mriqc.interfaces.functional.FunctionalQC>
250730-23:27:54,664 nipype.workflow INFO:
[Node] Finished "measures", elapsed time 0.878195s.
250730-23:27:55,704 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.subtract_mask" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-1_bold.nii.gz/subtract_mask".
250730-23:27:55,708 nipype.workflow INFO:
[Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
250730-23:27:55,735 nipype.workflow INFO:
[Node] Finished "subtract_mask", elapsed time 0.026047s.
250730-23:27:57,745 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/SpatialNormalization/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-1_bold.nii.gz/ResampleSegmentation".
250730-23:27:57,750 nipype.workflow INFO:
[Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
250730-23:28:00,223 nipype.workflow INFO:
[Node] Finished "ResampleSegmentation", elapsed time 2.457728s.
250730-23:28:01,741 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ComputeIQMs.measures" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-2_bold.nii.gz/measures".
250730-23:28:01,762 nipype.workflow INFO:
[Node] Executing "measures" <mriqc.interfaces.functional.FunctionalQC>
250730-23:28:02,640 nipype.workflow INFO:
[Node] Finished "measures", elapsed time 0.87514s.
250730-23:28:03,856 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.subtract_mask" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-2_bold.nii.gz/subtract_mask".
250730-23:28:03,859 nipype.workflow INFO:
[Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
250730-23:28:03,886 nipype.workflow INFO:
[Node] Finished "subtract_mask", elapsed time 0.02524s.
250730-23:28:04,680 nipype.workflow INFO:
[Node] Finished "fsl_bet", elapsed time 109.15026s.
250730-23:28:05,753 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/SpatialNormalization/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-2_bold.nii.gz/ResampleSegmentation".
250730-23:28:05,758 nipype.workflow INFO:
[Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
250730-23:28:05,761 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ComputeIQMs.measures" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-1_bold.nii.gz/measures".
250730-23:28:05,772 nipype.workflow INFO:
[Node] Executing "measures" <mriqc.interfaces.functional.FunctionalQC>
250730-23:28:06,865 nipype.workflow INFO:
[Node] Finished "measures", elapsed time 1.090692s.
250730-23:28:07,741 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.subtract_mask" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-1_bold.nii.gz/subtract_mask".
250730-23:28:07,744 nipype.workflow INFO:
[Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
250730-23:28:07,760 nipype.workflow INFO:
[Node] Finished "subtract_mask", elapsed time 0.014444s.
250730-23:28:07,992 nipype.workflow INFO:
[Node] Finished "ResampleSegmentation", elapsed time 2.231306s.
250730-23:28:09,734 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ComputeIQMs.measures" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-2_bold.nii.gz/measures".
250730-23:28:09,734 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/SpatialNormalization/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-1_bold.nii.gz/ResampleSegmentation".
250730-23:28:09,738 nipype.workflow INFO:
[Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
250730-23:28:09,740 nipype.workflow INFO:
[Node] Executing "measures" <mriqc.interfaces.functional.FunctionalQC>
250730-23:28:10,717 nipype.workflow INFO:
[Node] Finished "measures", elapsed time 0.976184s.
250730-23:28:11,940 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.subtract_mask" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-2_bold.nii.gz/subtract_mask".
250730-23:28:11,945 nipype.workflow INFO:
[Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
250730-23:28:11,978 nipype.workflow INFO:
[Node] Finished "subtract_mask", elapsed time 0.032547s.
250730-23:28:12,317 nipype.workflow INFO:
[Node] Finished "ResampleSegmentation", elapsed time 2.577763s.
250730-23:28:13,735 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ComputeIQMs.measures" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-1_bold.nii.gz/measures".
250730-23:28:13,737 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.subtract_mask" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-1_bold.nii.gz/subtract_mask".
250730-23:28:13,739 nipype.workflow INFO:
[Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
250730-23:28:13,741 nipype.workflow INFO:
[Node] Executing "measures" <mriqc.interfaces.functional.FunctionalQC>
250730-23:28:13,778 nipype.workflow INFO:
[Node] Finished "subtract_mask", elapsed time 0.034211s.
250730-23:28:14,580 nipype.workflow INFO:
[Node] Finished "measures", elapsed time 0.836654s.
250730-23:28:15,845 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ComputeIQMs.measures" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-2_bold.nii.gz/measures".
250730-23:28:15,846 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.subtract_mask" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-2_bold.nii.gz/subtract_mask".
250730-23:28:15,851 nipype.workflow INFO:
[Node] Executing "measures" <mriqc.interfaces.functional.FunctionalQC>
250730-23:28:15,851 nipype.workflow INFO:
[Node] Executing "subtract_mask" <niworkflows.interfaces.morphology.BinarySubtraction>
250730-23:28:15,891 nipype.workflow INFO:
[Node] Finished "subtract_mask", elapsed time 0.038273s.
250730-23:28:16,982 nipype.workflow INFO:
[Node] Finished "measures", elapsed time 1.130109s.
250730-23:28:17,956 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.ReportsWorkflow.PlotHeadmask" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..anat..sub-02_T1w.nii.gz/PlotHeadmask".
250730-23:28:17,956 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.ReportsWorkflow.PlotHeadmask" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..anat..sub-01_T1w.nii.gz/PlotHeadmask".
250730-23:28:17,959 nipype.workflow INFO:
[Node] Executing "PlotHeadmask" <mriqc.interfaces.viz.PlotContours>
250730-23:28:17,962 nipype.workflow INFO:
[Node] Executing "PlotHeadmask" <mriqc.interfaces.viz.PlotContours>
250730-23:28:23,857 nipype.workflow INFO:
[Node] Finished "fsl_bet", elapsed time 114.114531s.
250730-23:28:26,113 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.ReportsWorkflow.PlotHeadmask" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..anat..sub-03_T1w.nii.gz/PlotHeadmask".
250730-23:28:26,117 nipype.workflow INFO:
[Node] Executing "PlotHeadmask" <mriqc.interfaces.viz.PlotContours>
250730-23:28:30,961 nipype.workflow INFO:
[Node] Finished "PlotHeadmask", elapsed time 13.000639s.
250730-23:28:31,907 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ComputeIQMs.datasink" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-1_bold.nii.gz/datasink".
250730-23:28:31,932 nipype.workflow INFO:
[Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
250730-23:28:31,946 nipype.workflow INFO:
[Node] Finished "datasink", elapsed time 0.002755s.
250730-23:28:32,169 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.parcels" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-1_bold.nii.gz/parcels".
250730-23:28:32,174 nipype.workflow INFO:
[Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
250730-23:28:32,209 nipype.workflow INFO:
[Node] Finished "parcels", elapsed time 0.033615s.
250730-23:28:33,727 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ComputeIQMs.datasink" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-2_bold.nii.gz/datasink".
250730-23:28:33,742 nipype.workflow INFO:
[Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
250730-23:28:33,746 nipype.workflow INFO:
[Node] Finished "datasink", elapsed time 0.000729s.
250730-23:28:33,886 nipype.workflow INFO:
[Node] Finished "PlotHeadmask", elapsed time 15.922121s.
250730-23:28:33,938 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.parcels" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-2_bold.nii.gz/parcels".
250730-23:28:33,945 nipype.workflow INFO:
[Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
250730-23:28:33,979 nipype.workflow INFO:
[Node] Finished "parcels", elapsed time 0.031537s.
250730-23:28:35,258 nipype.workflow INFO:
[Node] Finished "PlotHeadmask", elapsed time 9.139653s.
250730-23:28:35,736 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ComputeIQMs.datasink" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-1_bold.nii.gz/datasink".
250730-23:28:35,750 nipype.workflow INFO:
[Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
250730-23:28:35,753 nipype.workflow INFO:
[Node] Finished "datasink", elapsed time 0.00254s.
250730-23:28:35,938 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ComputeIQMs.datasink" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-2_bold.nii.gz/datasink".
250730-23:28:35,940 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.parcels" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-1_bold.nii.gz/parcels".
250730-23:28:35,944 nipype.workflow INFO:
[Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
250730-23:28:35,952 nipype.workflow INFO:
[Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
250730-23:28:35,954 nipype.workflow INFO:
[Node] Finished "datasink", elapsed time 0.000735s.
250730-23:28:35,983 nipype.workflow INFO:
[Node] Finished "parcels", elapsed time 0.038413s.
250730-23:28:36,148 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ComputeIQMs.datasink" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-1_bold.nii.gz/datasink".
250730-23:28:36,163 nipype.workflow INFO:
[Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
250730-23:28:36,168 nipype.workflow INFO:
[Node] Finished "datasink", elapsed time 0.000832s.
250730-23:28:36,348 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ComputeIQMs.datasink" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-2_bold.nii.gz/datasink".
250730-23:28:36,363 nipype.workflow INFO:
[Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
250730-23:28:36,368 nipype.workflow INFO:
[Node] Finished "datasink", elapsed time 0.003439s.
250730-23:28:36,549 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.BigPlot" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-1_bold.nii.gz/BigPlot".
250730-23:28:36,550 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.BigPlot" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-2_bold.nii.gz/BigPlot".
250730-23:28:36,559 nipype.workflow INFO:
[Node] Executing "BigPlot" <niworkflows.interfaces.plotting.FMRISummary>
250730-23:28:36,562 nipype.workflow INFO:
[Node] Executing "BigPlot" <niworkflows.interfaces.plotting.FMRISummary>
250730-23:28:37,844 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.BigPlot" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-1_bold.nii.gz/BigPlot".
250730-23:28:37,851 nipype.workflow INFO:
[Node] Executing "BigPlot" <niworkflows.interfaces.plotting.FMRISummary>
250730-23:28:40,288 nipype.workflow INFO:
[Node] Finished "EPI2MNI", elapsed time 146.641216s.
250730-23:28:41,793 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.SpatialNormalization.SpatialNormalization" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/SpatialNormalization/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..anat..sub-01_T1w.nii.gz/SpatialNormalization".
250730-23:28:41,798 nipype.workflow INFO:
[Node] Executing "SpatialNormalization" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
250730-23:28:42,637 nipype.workflow INFO:
[Node] Finished "BigPlot", elapsed time 6.076394s.
250730-23:28:43,82 nipype.workflow INFO:
[Node] Finished "BigPlot", elapsed time 6.51821s.
250730-23:28:43,755 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/SpatialNormalization/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-2_bold.nii.gz/ResampleSegmentation".
250730-23:28:43,756 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.MergePlots" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-1_bold.nii.gz/MergePlots".
250730-23:28:43,759 nipype.workflow INFO:
[Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
250730-23:28:43,774 nipype.workflow INFO:
[Node] Executing "MergePlots" <nipype.interfaces.utility.base.Merge>
250730-23:28:43,778 nipype.workflow INFO:
[Node] Finished "MergePlots", elapsed time 0.000457s.
250730-23:28:43,963 nipype.workflow INFO:
[Node] Finished "BigPlot", elapsed time 6.111191s.
250730-23:28:45,832 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.MergePlots" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-2_bold.nii.gz/MergePlots".
250730-23:28:45,836 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.MergePlots" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-1_bold.nii.gz/MergePlots".
250730-23:28:45,841 nipype.workflow INFO:
[Node] Executing "MergePlots" <nipype.interfaces.utility.base.Merge>
250730-23:28:45,842 nipype.workflow INFO:
[Node] Finished "MergePlots", elapsed time 0.00032s.
250730-23:28:45,842 nipype.workflow INFO:
[Node] Executing "MergePlots" <nipype.interfaces.utility.base.Merge>
250730-23:28:45,844 nipype.workflow INFO:
[Node] Finished "MergePlots", elapsed time 0.000257s.
250730-23:28:45,956 nipype.workflow INFO:
[Node] Finished "ResampleSegmentation", elapsed time 2.195592s.
250730-23:28:47,805 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.parcels" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-2_bold.nii.gz/parcels".
250730-23:28:47,808 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.GenerateReport" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-1_bold.nii.gz/GenerateReport".
250730-23:28:47,809 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.GenerateReport" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-2_bold.nii.gz/GenerateReport".
250730-23:28:47,814 nipype.workflow INFO:
[Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
250730-23:28:47,814 nipype.workflow INFO:
[Node] Executing "GenerateReport" <mriqc.interfaces.reports.IndividualReport>
250730-23:28:47,816 nipype.workflow INFO:
[Node] Executing "GenerateReport" <mriqc.interfaces.reports.IndividualReport>
250730-23:28:47,822 cli WARNING:
Building bold report: no exclude index was found
250730-23:28:47,842 cli WARNING:
Building bold report: no exclude index was found
250730-23:28:47,868 nipype.workflow INFO:
[Node] Finished "parcels", elapsed time 0.052543s.
250730-23:28:47,951 cli INFO:
Generated individual log: /storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-2_bold.nii.gz/GenerateReport/sub-01_task-flanker_run-2_bold.html
250730-23:28:47,956 nipype.workflow INFO:
[Node] Finished "GenerateReport", elapsed time 0.140782s.
250730-23:28:47,958 cli INFO:
Generated individual log: /storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-1_bold.nii.gz/GenerateReport/sub-01_task-flanker_run-1_bold.html
250730-23:28:47,959 nipype.workflow INFO:
[Node] Finished "GenerateReport", elapsed time 0.141583s.
250730-23:28:49,808 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.dsplots" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-1_bold.nii.gz/dsplots".
250730-23:28:49,811 nipype.workflow INFO:
[Node] Executing "dsplots" <nipype.interfaces.io.DataSink>
250730-23:28:49,812 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.GenerateReport" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-1_bold.nii.gz/GenerateReport".
250730-23:28:49,812 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.BigPlot" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-2_bold.nii.gz/BigPlot".
250730-23:28:49,816 nipype.workflow INFO:
[Node] Executing "GenerateReport" <mriqc.interfaces.reports.IndividualReport>
250730-23:28:49,817 cli WARNING:
Building bold report: no exclude index was found
250730-23:28:49,819 nipype.workflow INFO:
[Node] Executing "BigPlot" <niworkflows.interfaces.plotting.FMRISummary>
250730-23:28:49,834 nipype.workflow INFO:
[Node] Finished "dsplots", elapsed time 0.000766s.
250730-23:28:49,877 cli INFO:
Generated individual log: /storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-1_bold.nii.gz/GenerateReport/sub-02_task-flanker_run-1_bold.html
250730-23:28:49,878 nipype.workflow INFO:
[Node] Finished "GenerateReport", elapsed time 0.061076s.
250730-23:28:50,33 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.dsplots" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..func..sub-01_task-flanker_run-2_bold.nii.gz/dsplots".
250730-23:28:50,36 nipype.workflow INFO:
[Node] Executing "dsplots" <nipype.interfaces.io.DataSink>
250730-23:28:50,37 nipype.workflow INFO:
[Node] Finished "dsplots", elapsed time 0.000428s.
250730-23:28:51,815 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.dsplots" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-1_bold.nii.gz/dsplots".
250730-23:28:51,820 nipype.workflow INFO:
[Node] Executing "dsplots" <nipype.interfaces.io.DataSink>
250730-23:28:51,822 nipype.workflow INFO:
[Node] Finished "dsplots", elapsed time 0.000423s.
250730-23:28:55,194 nipype.workflow INFO:
[Node] Finished "BigPlot", elapsed time 5.37354s.
250730-23:28:55,900 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.MergePlots" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-2_bold.nii.gz/MergePlots".
250730-23:28:55,906 nipype.workflow INFO:
[Node] Executing "MergePlots" <nipype.interfaces.utility.base.Merge>
250730-23:28:55,907 nipype.workflow INFO:
[Node] Finished "MergePlots", elapsed time 0.000211s.
250730-23:28:57,809 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.GenerateReport" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-2_bold.nii.gz/GenerateReport".
250730-23:28:57,820 nipype.workflow INFO:
[Node] Executing "GenerateReport" <mriqc.interfaces.reports.IndividualReport>
250730-23:28:57,822 cli WARNING:
Building bold report: no exclude index was found
250730-23:28:57,891 cli INFO:
Generated individual log: /storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-2_bold.nii.gz/GenerateReport/sub-02_task-flanker_run-2_bold.html
250730-23:28:57,893 nipype.workflow INFO:
[Node] Finished "GenerateReport", elapsed time 0.071047s.
250730-23:28:59,849 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.dsplots" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..func..sub-02_task-flanker_run-2_bold.nii.gz/dsplots".
250730-23:28:59,853 nipype.workflow INFO:
[Node] Executing "dsplots" <nipype.interfaces.io.DataSink>
250730-23:28:59,854 nipype.workflow INFO:
[Node] Finished "dsplots", elapsed time 0.000359s.
250730-23:29:11,103 nipype.workflow INFO:
[Node] Finished "EPI2MNI", elapsed time 113.323142s.
250730-23:29:11,789 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.SpatialNormalization.SpatialNormalization" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/SpatialNormalization/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..anat..sub-02_T1w.nii.gz/SpatialNormalization".
250730-23:29:11,789 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/SpatialNormalization/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-1_bold.nii.gz/ResampleSegmentation".
250730-23:29:11,793 nipype.workflow INFO:
[Node] Executing "SpatialNormalization" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
250730-23:29:11,793 nipype.workflow INFO:
[Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
250730-23:29:13,293 nipype.workflow INFO:
[Node] Finished "ResampleSegmentation", elapsed time 1.498963s.
250730-23:29:13,824 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.parcels" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-1_bold.nii.gz/parcels".
250730-23:29:13,829 nipype.workflow INFO:
[Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
250730-23:29:13,877 nipype.workflow INFO:
[Node] Finished "parcels", elapsed time 0.047961s.
250730-23:29:15,800 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.BigPlot" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-1_bold.nii.gz/BigPlot".
250730-23:29:15,807 nipype.workflow INFO:
[Node] Executing "BigPlot" <niworkflows.interfaces.plotting.FMRISummary>
250730-23:29:22,215 nipype.workflow INFO:
[Node] Finished "BigPlot", elapsed time 6.405244s.
250730-23:29:23,851 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.MergePlots" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-1_bold.nii.gz/MergePlots".
250730-23:29:23,858 nipype.workflow INFO:
[Node] Executing "MergePlots" <nipype.interfaces.utility.base.Merge>
250730-23:29:23,859 nipype.workflow INFO:
[Node] Finished "MergePlots", elapsed time 0.000252s.
250730-23:29:25,813 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.GenerateReport" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-1_bold.nii.gz/GenerateReport".
250730-23:29:25,820 nipype.workflow INFO:
[Node] Executing "GenerateReport" <mriqc.interfaces.reports.IndividualReport>
250730-23:29:25,821 cli WARNING:
Building bold report: no exclude index was found
250730-23:29:25,898 cli INFO:
Generated individual log: /storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-1_bold.nii.gz/GenerateReport/sub-03_task-flanker_run-1_bold.html
250730-23:29:25,899 nipype.workflow INFO:
[Node] Finished "GenerateReport", elapsed time 0.077345s.
250730-23:29:27,810 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.dsplots" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-1_bold.nii.gz/dsplots".
250730-23:29:27,814 nipype.workflow INFO:
[Node] Executing "dsplots" <nipype.interfaces.io.DataSink>
250730-23:29:27,815 nipype.workflow INFO:
[Node] Finished "dsplots", elapsed time 0.000352s.
250730-23:29:33,742 nipype.workflow INFO:
[Node] Finished "EPI2MNI", elapsed time 135.955205s.
250730-23:29:35,901 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.SpatialNormalization.SpatialNormalization" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/SpatialNormalization/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..anat..sub-03_T1w.nii.gz/SpatialNormalization".
250730-23:29:35,902 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.SpatialNormalization.ResampleSegmentation" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/SpatialNormalization/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-2_bold.nii.gz/ResampleSegmentation".
250730-23:29:35,905 nipype.workflow INFO:
[Node] Executing "SpatialNormalization" <niworkflows.interfaces.reportlets.registration.SpatialNormalizationRPT>
250730-23:29:35,906 nipype.workflow INFO:
[Node] Executing "ResampleSegmentation" <nipype.interfaces.ants.resampling.ApplyTransforms>
250730-23:29:37,459 nipype.workflow INFO:
[Node] Finished "ResampleSegmentation", elapsed time 1.551962s.
250730-23:29:37,864 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.parcels" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-2_bold.nii.gz/parcels".
250730-23:29:37,868 nipype.workflow INFO:
[Node] Executing "parcels" <nipype.interfaces.utility.wrappers.Function>
250730-23:29:37,900 nipype.workflow INFO:
[Node] Finished "parcels", elapsed time 0.030655s.
250730-23:29:39,869 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.BigPlot" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-2_bold.nii.gz/BigPlot".
250730-23:29:39,886 nipype.workflow INFO:
[Node] Executing "BigPlot" <niworkflows.interfaces.plotting.FMRISummary>
250730-23:29:46,830 nipype.workflow INFO:
[Node] Finished "BigPlot", elapsed time 6.938208s.
250730-23:29:47,983 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.MergePlots" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-2_bold.nii.gz/MergePlots".
250730-23:29:47,989 nipype.workflow INFO:
[Node] Executing "MergePlots" <nipype.interfaces.utility.base.Merge>
250730-23:29:47,991 nipype.workflow INFO:
[Node] Finished "MergePlots", elapsed time 0.00024s.
250730-23:29:49,889 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.GenerateReport" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-2_bold.nii.gz/GenerateReport".
250730-23:29:49,897 nipype.workflow INFO:
[Node] Executing "GenerateReport" <mriqc.interfaces.reports.IndividualReport>
250730-23:29:49,898 cli WARNING:
Building bold report: no exclude index was found
250730-23:29:49,991 cli INFO:
Generated individual log: /storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-2_bold.nii.gz/GenerateReport/sub-03_task-flanker_run-2_bold.html
250730-23:29:49,992 nipype.workflow INFO:
[Node] Finished "GenerateReport", elapsed time 0.094087s.
250730-23:29:51,916 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.funcMRIQC.ReportsWorkflow.dsplots" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/funcMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..func..sub-03_task-flanker_run-2_bold.nii.gz/dsplots".
250730-23:29:51,922 nipype.workflow INFO:
[Node] Executing "dsplots" <nipype.interfaces.io.DataSink>
250730-23:29:51,924 nipype.workflow INFO:
[Node] Finished "dsplots", elapsed time 0.000671s.
250730-23:30:49,510 nipype.workflow INFO:
[Node] Finished "SpatialNormalization", elapsed time 127.711254s.
250730-23:30:49,990 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.invert_xfm" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/AirMaskWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..anat..sub-01_T1w.nii.gz/invert_xfm".
250730-23:30:49,997 nipype.workflow INFO:
[Node] Executing "invert_xfm" <nipype.interfaces.ants.resampling.ApplyTransforms>
250730-23:30:52,213 nipype.workflow INFO:
[Node] Setting-up "_MNItpms2t10" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..anat..sub-01_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t10".
250730-23:30:52,215 nipype.workflow INFO:
[Node] Setting-up "_MNItpms2t11" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..anat..sub-01_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t11".
250730-23:30:52,217 nipype.workflow INFO:
[Node] Setting-up "_MNItpms2t12" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..anat..sub-01_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t12".
250730-23:30:52,218 nipype.workflow INFO:
[Node] Executing "_MNItpms2t10" <nipype.interfaces.ants.resampling.ApplyTransforms>
250730-23:30:52,220 nipype.workflow INFO:
[Node] Executing "_MNItpms2t11" <nipype.interfaces.ants.resampling.ApplyTransforms>
250730-23:30:52,220 nipype.workflow INFO:
[Node] Executing "_MNItpms2t12" <nipype.interfaces.ants.resampling.ApplyTransforms>
250730-23:30:53,267 nipype.workflow INFO:
[Node] Finished "SpatialNormalization", elapsed time 101.472463s.
250730-23:30:53,986 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.segmentation" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..anat..sub-01_T1w.nii.gz/segmentation".
250730-23:30:53,991 nipype.workflow INFO:
[Node] Executing "segmentation" <nipype.interfaces.fsl.preprocess.FAST>
250730-23:30:55,33 nipype.workflow INFO:
[Node] Finished "_MNItpms2t10", elapsed time 2.813022s.
250730-23:30:55,137 nipype.workflow INFO:
[Node] Finished "_MNItpms2t11", elapsed time 2.91568s.
250730-23:30:55,970 nipype.workflow INFO:
[Node] Finished "_MNItpms2t12", elapsed time 3.749465s.
250730-23:30:56,69 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.invert_xfm" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/AirMaskWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..anat..sub-02_T1w.nii.gz/invert_xfm".
250730-23:30:56,71 nipype.workflow INFO:
[Node] Setting-up "_MNItpms2t10" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..anat..sub-02_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t10".
250730-23:30:56,73 nipype.workflow INFO:
[Node] Executing "invert_xfm" <nipype.interfaces.ants.resampling.ApplyTransforms>
250730-23:30:56,74 nipype.workflow INFO:
[Node] Executing "_MNItpms2t10" <nipype.interfaces.ants.resampling.ApplyTransforms>
250730-23:30:58,126 nipype.workflow INFO:
[Node] Setting-up "_MNItpms2t10" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..anat..sub-01_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t10".
250730-23:30:58,132 nipype.workflow INFO:
[Node] Cached "_MNItpms2t10" - collecting precomputed outputs
250730-23:30:58,132 nipype.workflow INFO:
[Node] "_MNItpms2t10" found cached.
250730-23:30:58,133 nipype.workflow INFO:
[Node] Setting-up "_MNItpms2t11" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..anat..sub-01_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t11".
250730-23:30:58,134 nipype.workflow INFO:
[Node] Cached "_MNItpms2t11" - collecting precomputed outputs
250730-23:30:58,134 nipype.workflow INFO:
[Node] "_MNItpms2t11" found cached.
250730-23:30:58,135 nipype.workflow INFO:
[Node] Setting-up "_MNItpms2t12" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..anat..sub-01_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t12".
250730-23:30:58,136 nipype.workflow INFO:
[Node] Cached "_MNItpms2t12" - collecting precomputed outputs
250730-23:30:58,136 nipype.workflow INFO:
[Node] "_MNItpms2t12" found cached.
250730-23:30:59,220 nipype.workflow INFO:
[Node] Finished "_MNItpms2t10", elapsed time 3.1440609999999998s.
250730-23:31:00,25 nipype.workflow INFO:
[Node] Setting-up "_MNItpms2t11" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..anat..sub-02_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t11".
250730-23:31:00,26 nipype.workflow INFO:
[Node] Setting-up "_MNItpms2t12" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..anat..sub-02_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t12".
250730-23:31:00,28 nipype.workflow INFO:
[Node] Executing "_MNItpms2t11" <nipype.interfaces.ants.resampling.ApplyTransforms>
250730-23:31:00,33 nipype.workflow INFO:
[Node] Executing "_MNItpms2t12" <nipype.interfaces.ants.resampling.ApplyTransforms>
250730-23:31:02,877 nipype.workflow INFO:
[Node] Finished "_MNItpms2t12", elapsed time 2.843019s.
250730-23:31:04,195 nipype.workflow INFO:
[Node] Finished "_MNItpms2t11", elapsed time 4.16544s.
250730-23:31:06,183 nipype.workflow INFO:
[Node] Setting-up "_MNItpms2t10" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..anat..sub-02_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t10".
250730-23:31:06,184 nipype.workflow INFO:
[Node] Cached "_MNItpms2t10" - collecting precomputed outputs
250730-23:31:06,184 nipype.workflow INFO:
[Node] "_MNItpms2t10" found cached.
250730-23:31:06,185 nipype.workflow INFO:
[Node] Setting-up "_MNItpms2t11" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..anat..sub-02_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t11".
250730-23:31:06,186 nipype.workflow INFO:
[Node] Cached "_MNItpms2t11" - collecting precomputed outputs
250730-23:31:06,186 nipype.workflow INFO:
[Node] "_MNItpms2t11" found cached.
250730-23:31:06,187 nipype.workflow INFO:
[Node] Setting-up "_MNItpms2t12" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..anat..sub-02_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t12".
250730-23:31:06,188 nipype.workflow INFO:
[Node] Cached "_MNItpms2t12" - collecting precomputed outputs
250730-23:31:06,188 nipype.workflow INFO:
[Node] "_MNItpms2t12" found cached.
250730-23:31:23,729 nipype.workflow INFO:
[Node] Finished "SpatialNormalization", elapsed time 107.821582s.
250730-23:31:24,85 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.invert_xfm" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/AirMaskWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..anat..sub-03_T1w.nii.gz/invert_xfm".
250730-23:31:24,89 nipype.workflow INFO:
[Node] Executing "invert_xfm" <nipype.interfaces.ants.resampling.ApplyTransforms>
250730-23:31:26,89 nipype.workflow INFO:
[Node] Setting-up "_MNItpms2t10" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..anat..sub-03_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t10".
250730-23:31:26,90 nipype.workflow INFO:
[Node] Setting-up "_MNItpms2t11" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..anat..sub-03_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t11".
250730-23:31:26,94 nipype.workflow INFO:
[Node] Executing "_MNItpms2t11" <nipype.interfaces.ants.resampling.ApplyTransforms>
250730-23:31:26,100 nipype.workflow INFO:
[Node] Executing "_MNItpms2t10" <nipype.interfaces.ants.resampling.ApplyTransforms>
250730-23:31:29,446 nipype.workflow INFO:
[Node] Finished "_MNItpms2t11", elapsed time 3.3502549999999998s.
250730-23:31:29,620 nipype.workflow INFO:
[Node] Finished "_MNItpms2t10", elapsed time 3.514935s.
250730-23:31:30,130 nipype.workflow INFO:
[Node] Setting-up "_MNItpms2t12" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..anat..sub-03_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t12".
250730-23:31:30,133 nipype.workflow INFO:
[Node] Executing "_MNItpms2t12" <nipype.interfaces.ants.resampling.ApplyTransforms>
250730-23:31:32,862 nipype.workflow INFO:
[Node] Finished "_MNItpms2t12", elapsed time 2.7275970000000003s.
250730-23:31:34,217 nipype.workflow INFO:
[Node] Setting-up "_MNItpms2t10" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..anat..sub-03_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t10".
250730-23:31:34,218 nipype.workflow INFO:
[Node] Cached "_MNItpms2t10" - collecting precomputed outputs
250730-23:31:34,218 nipype.workflow INFO:
[Node] "_MNItpms2t10" found cached.
250730-23:31:34,219 nipype.workflow INFO:
[Node] Setting-up "_MNItpms2t11" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..anat..sub-03_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t11".
250730-23:31:34,224 nipype.workflow INFO:
[Node] Cached "_MNItpms2t11" - collecting precomputed outputs
250730-23:31:34,224 nipype.workflow INFO:
[Node] "_MNItpms2t11" found cached.
250730-23:31:34,225 nipype.workflow INFO:
[Node] Setting-up "_MNItpms2t12" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..anat..sub-03_T1w.nii.gz/MNItpms2t1/mapflow/_MNItpms2t12".
250730-23:31:34,226 nipype.workflow INFO:
[Node] Cached "_MNItpms2t12" - collecting precomputed outputs
250730-23:31:34,226 nipype.workflow INFO:
[Node] "_MNItpms2t12" found cached.
250730-23:31:40,287 nipype.workflow INFO:
[Node] Finished "invert_xfm", elapsed time 50.288054s.
250730-23:31:42,34 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.ArtifactMask" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/AirMaskWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..anat..sub-01_T1w.nii.gz/ArtifactMask".
250730-23:31:42,43 nipype.workflow INFO:
[Node] Executing "ArtifactMask" <mriqc.interfaces.anatomical.ArtifactMask>
250730-23:31:42,844 nipype.workflow INFO:
[Node] Finished "invert_xfm", elapsed time 46.768882s.
250730-23:31:43,988 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.ArtifactMask" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/AirMaskWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..anat..sub-02_T1w.nii.gz/ArtifactMask".
250730-23:31:43,994 nipype.workflow INFO:
[Node] Executing "ArtifactMask" <mriqc.interfaces.anatomical.ArtifactMask>
250730-23:31:48,494 nipype.workflow INFO:
[Node] Finished "ArtifactMask", elapsed time 6.449273s.
250730-23:31:49,269 nipype.workflow INFO:
[Node] Finished "ArtifactMask", elapsed time 5.273243s.
250730-23:31:50,11 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.provenance" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..anat..sub-01_T1w.nii.gz/provenance".
250730-23:31:50,15 nipype.workflow INFO:
[Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
250730-23:31:50,132 nipype.workflow INFO:
[Node] Finished "provenance", elapsed time 0.116223s.
250730-23:31:50,293 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.provenance" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..anat..sub-02_T1w.nii.gz/provenance".
250730-23:31:50,298 nipype.workflow INFO:
[Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
250730-23:31:50,301 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.ComputeQI2" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..anat..sub-01_T1w.nii.gz/ComputeQI2".
250730-23:31:50,301 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.ReportsWorkflow.PlotAirmask" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..anat..sub-01_T1w.nii.gz/PlotAirmask".
250730-23:31:50,305 nipype.workflow INFO:
[Node] Executing "ComputeQI2" <mriqc.interfaces.anatomical.ComputeQI2>
250730-23:31:50,305 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.ReportsWorkflow.PlotArtmask" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..anat..sub-01_T1w.nii.gz/PlotArtmask".
250730-23:31:50,307 nipype.workflow INFO:
[Node] Executing "PlotAirmask" <mriqc.interfaces.viz.PlotContours>
250730-23:31:50,311 nipype.workflow INFO:
[Node] Executing "PlotArtmask" <mriqc.interfaces.viz.PlotContours>
250730-23:31:50,424 nipype.workflow INFO:
[Node] Finished "provenance", elapsed time 0.124858s.
250730-23:31:50,576 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.ComputeQI2" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..anat..sub-02_T1w.nii.gz/ComputeQI2".
250730-23:31:50,581 nipype.workflow INFO:
[Node] Executing "ComputeQI2" <mriqc.interfaces.anatomical.ComputeQI2>
250730-23:31:58,731 nipype.workflow INFO:
[Node] Finished "PlotAirmask", elapsed time 8.422848s.
250730-23:31:59,447 nipype.workflow INFO:
[Node] Finished "PlotArtmask", elapsed time 9.134213s.
250730-23:32:00,34 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.ReportsWorkflow.PlotAirmask" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..anat..sub-02_T1w.nii.gz/PlotAirmask".
250730-23:32:00,36 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.ReportsWorkflow.PlotArtmask" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..anat..sub-02_T1w.nii.gz/PlotArtmask".
250730-23:32:00,40 nipype.workflow INFO:
[Node] Executing "PlotAirmask" <mriqc.interfaces.viz.PlotContours>
250730-23:32:00,41 nipype.workflow INFO:
[Node] Executing "PlotArtmask" <mriqc.interfaces.viz.PlotContours>
250730-23:32:02,276 nipype.workflow INFO:
[Node] Finished "invert_xfm", elapsed time 38.185916s.
250730-23:32:03,996 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.AirMaskWorkflow.ArtifactMask" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/AirMaskWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..anat..sub-03_T1w.nii.gz/ArtifactMask".
250730-23:32:04,1 nipype.workflow INFO:
[Node] Executing "ArtifactMask" <mriqc.interfaces.anatomical.ArtifactMask>
250730-23:32:06,748 nipype.workflow INFO:
[Node] Finished "PlotAirmask", elapsed time 6.706278s.
250730-23:32:06,840 nipype.workflow INFO:
[Node] Finished "ComputeQI2", elapsed time 16.257315s.
250730-23:32:08,175 nipype.workflow INFO:
[Node] Finished "PlotArtmask", elapsed time 8.133291s.
250730-23:32:08,938 nipype.workflow INFO:
[Node] Finished "ComputeQI2", elapsed time 18.631741s.
250730-23:32:09,441 nipype.workflow INFO:
[Node] Finished "ArtifactMask", elapsed time 5.438447s.
250730-23:32:09,994 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.segmentation" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..anat..sub-02_T1w.nii.gz/segmentation".
250730-23:32:10,4 nipype.workflow INFO:
[Node] Executing "segmentation" <nipype.interfaces.fsl.preprocess.FAST>
250730-23:36:19,797 nipype.workflow INFO:
[Node] Finished "segmentation", elapsed time 325.801454s.
250730-23:36:20,398 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.segmentation" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..anat..sub-03_T1w.nii.gz/segmentation".
250730-23:36:20,424 nipype.workflow INFO:
[Node] Executing "segmentation" <nipype.interfaces.fsl.preprocess.FAST>
250730-23:37:01,885 nipype.workflow INFO:
[Node] Finished "segmentation", elapsed time 291.878428s.
250730-23:37:02,430 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.harmonize" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..anat..sub-02_T1w.nii.gz/harmonize".
250730-23:37:02,430 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.harmonize" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..anat..sub-01_T1w.nii.gz/harmonize".
250730-23:37:02,431 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.ReportsWorkflow.PlotSegmentation" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..anat..sub-01_T1w.nii.gz/PlotSegmentation".
250730-23:37:02,434 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.ReportsWorkflow.PlotSegmentation" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..anat..sub-02_T1w.nii.gz/PlotSegmentation".
250730-23:37:02,438 nipype.workflow INFO:
[Node] Executing "PlotSegmentation" <mriqc.interfaces.viz.PlotContours>
250730-23:37:02,438 nipype.workflow INFO:
[Node] Executing "harmonize" <mriqc.interfaces.anatomical.Harmonize>
250730-23:37:02,440 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.provenance" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..anat..sub-03_T1w.nii.gz/provenance".
250730-23:37:02,442 nipype.workflow INFO:
[Node] Executing "PlotSegmentation" <mriqc.interfaces.viz.PlotContours>
250730-23:37:02,446 nipype.workflow INFO:
[Node] Executing "harmonize" <mriqc.interfaces.anatomical.Harmonize>
250730-23:37:02,461 nipype.workflow INFO:
[Node] Executing "provenance" <mriqc.interfaces.reports.AddProvenance>
250730-23:37:02,734 nipype.workflow INFO:
[Node] Finished "provenance", elapsed time 0.271839s.
250730-23:37:02,992 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.ComputeQI2" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..anat..sub-03_T1w.nii.gz/ComputeQI2".
250730-23:37:02,996 nipype.workflow INFO:
[Node] Executing "ComputeQI2" <mriqc.interfaces.anatomical.ComputeQI2>
250730-23:37:04,446 nipype.workflow INFO:
[Node] Finished "harmonize", elapsed time 2.005703s.
250730-23:37:04,805 nipype.workflow INFO:
[Node] Finished "harmonize", elapsed time 2.356801s.
250730-23:37:06,462 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.measures" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..anat..sub-01_T1w.nii.gz/measures".
250730-23:37:06,465 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.measures" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..anat..sub-02_T1w.nii.gz/measures".
250730-23:37:06,480 nipype.workflow INFO:
[Node] Executing "measures" <mriqc.interfaces.anatomical.StructuralQC>
250730-23:37:06,493 nipype.workflow INFO:
[Node] Executing "measures" <mriqc.interfaces.anatomical.StructuralQC>
250730-23:37:12,365 nipype.workflow INFO:
[Node] Finished "PlotSegmentation", elapsed time 9.925964s.
250730-23:37:14,484 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.ReportsWorkflow.PlotAirmask" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..anat..sub-03_T1w.nii.gz/PlotAirmask".
250730-23:37:14,488 nipype.workflow INFO:
[Node] Executing "PlotAirmask" <mriqc.interfaces.viz.PlotContours>
250730-23:37:14,850 nipype.workflow INFO:
[Node] Finished "PlotSegmentation", elapsed time 12.406389s.
250730-23:37:16,464 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.ReportsWorkflow.PlotArtmask" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..anat..sub-03_T1w.nii.gz/PlotArtmask".
250730-23:37:16,470 nipype.workflow INFO:
[Node] Executing "PlotArtmask" <mriqc.interfaces.viz.PlotContours>
250730-23:37:20,469 nipype.workflow INFO:
[Node] Finished "ComputeQI2", elapsed time 17.472261s.
250730-23:37:22,544 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.ReportsWorkflow.MergePlots" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..anat..sub-01_T1w.nii.gz/MergePlots".
250730-23:37:22,554 nipype.workflow INFO:
[Node] Executing "MergePlots" <nipype.interfaces.utility.base.Merge>
250730-23:37:22,556 nipype.workflow INFO:
[Node] Finished "MergePlots", elapsed time 0.000295s.
250730-23:37:23,815 nipype.workflow INFO:
[Node] Finished "PlotAirmask", elapsed time 9.3261s.
250730-23:37:24,506 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.ReportsWorkflow.MergePlots" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..anat..sub-02_T1w.nii.gz/MergePlots".
250730-23:37:24,515 nipype.workflow INFO:
[Node] Executing "MergePlots" <nipype.interfaces.utility.base.Merge>
250730-23:37:24,517 nipype.workflow INFO:
[Node] Finished "MergePlots", elapsed time 0.0004s.
250730-23:37:26,154 nipype.workflow INFO:
[Node] Finished "PlotArtmask", elapsed time 9.682758s.
250730-23:37:31,337 nipype.workflow INFO:
[Node] Finished "measures", elapsed time 24.842318s.
250730-23:37:31,759 nipype.workflow INFO:
[Node] Finished "measures", elapsed time 25.278162000000002s.
250730-23:37:32,524 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.datasink" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..anat..sub-01_T1w.nii.gz/datasink".
250730-23:37:32,542 nipype.workflow INFO:
[Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
250730-23:37:32,552 nipype.workflow INFO:
[Node] Finished "datasink", elapsed time 0.002956s.
250730-23:37:32,732 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.datasink" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..anat..sub-02_T1w.nii.gz/datasink".
250730-23:37:32,745 nipype.workflow INFO:
[Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
250730-23:37:32,750 nipype.workflow INFO:
[Node] Finished "datasink", elapsed time 0.001609s.
250730-23:37:34,523 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.ReportsWorkflow.GenerateReport" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..anat..sub-01_T1w.nii.gz/GenerateReport".
250730-23:37:34,523 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.ReportsWorkflow.GenerateReport" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..anat..sub-02_T1w.nii.gz/GenerateReport".
250730-23:37:34,530 nipype.workflow INFO:
[Node] Executing "GenerateReport" <mriqc.interfaces.reports.IndividualReport>
250730-23:37:34,534 nipype.workflow INFO:
[Node] Executing "GenerateReport" <mriqc.interfaces.reports.IndividualReport>
250730-23:37:34,868 cli INFO:
Generated individual log: /storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..anat..sub-02_T1w.nii.gz/GenerateReport/sub-02_T1w.html
250730-23:37:34,871 nipype.workflow INFO:
[Node] Finished "GenerateReport", elapsed time 0.335129s.
250730-23:37:34,955 cli INFO:
Generated individual log: /storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..anat..sub-01_T1w.nii.gz/GenerateReport/sub-01_T1w.html
250730-23:37:34,957 nipype.workflow INFO:
[Node] Finished "GenerateReport", elapsed time 0.425237s.
250730-23:37:36,531 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.ReportsWorkflow.dsplots" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-01..anat..sub-01_T1w.nii.gz/dsplots".
250730-23:37:36,545 nipype.workflow INFO:
[Node] Executing "dsplots" <nipype.interfaces.io.DataSink>
250730-23:37:36,551 nipype.workflow INFO:
[Node] Finished "dsplots", elapsed time 0.000785s.
250730-23:37:36,863 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.ReportsWorkflow.dsplots" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-02..anat..sub-02_T1w.nii.gz/dsplots".
250730-23:37:36,876 nipype.workflow INFO:
[Node] Executing "dsplots" <nipype.interfaces.io.DataSink>
250730-23:37:36,880 nipype.workflow INFO:
[Node] Finished "dsplots", elapsed time 0.000643s.
250730-23:41:07,424 nipype.workflow INFO:
[Node] Finished "segmentation", elapsed time 286.998622s.
250730-23:41:08,722 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.ReportsWorkflow.PlotSegmentation" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..anat..sub-03_T1w.nii.gz/PlotSegmentation".
250730-23:41:08,723 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.harmonize" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..anat..sub-03_T1w.nii.gz/harmonize".
250730-23:41:08,734 nipype.workflow INFO:
[Node] Executing "PlotSegmentation" <mriqc.interfaces.viz.PlotContours>
250730-23:41:08,741 nipype.workflow INFO:
[Node] Executing "harmonize" <mriqc.interfaces.anatomical.Harmonize>
250730-23:41:10,917 nipype.workflow INFO:
[Node] Finished "harmonize", elapsed time 2.172624s.
250730-23:41:12,813 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.measures" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..anat..sub-03_T1w.nii.gz/measures".
250730-23:41:12,826 nipype.workflow INFO:
[Node] Executing "measures" <mriqc.interfaces.anatomical.StructuralQC>
250730-23:41:18,494 nipype.workflow INFO:
[Node] Finished "PlotSegmentation", elapsed time 9.758576s.
250730-23:41:18,709 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.ReportsWorkflow.MergePlots" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..anat..sub-03_T1w.nii.gz/MergePlots".
250730-23:41:18,718 nipype.workflow INFO:
[Node] Executing "MergePlots" <nipype.interfaces.utility.base.Merge>
250730-23:41:18,720 nipype.workflow INFO:
[Node] Finished "MergePlots", elapsed time 0.000381s.
250730-23:41:37,434 nipype.workflow INFO:
[Node] Finished "measures", elapsed time 24.606601s.
250730-23:41:38,776 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.ComputeIQMs.datasink" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ComputeIQMs/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..anat..sub-03_T1w.nii.gz/datasink".
250730-23:41:38,788 nipype.workflow INFO:
[Node] Executing "datasink" <mriqc.interfaces.bids.IQMFileSink>
250730-23:41:38,790 nipype.workflow INFO:
[Node] Finished "datasink", elapsed time 0.000972s.
250730-23:41:40,746 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.ReportsWorkflow.GenerateReport" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..anat..sub-03_T1w.nii.gz/GenerateReport".
250730-23:41:40,752 nipype.workflow INFO:
[Node] Executing "GenerateReport" <mriqc.interfaces.reports.IndividualReport>
250730-23:41:40,935 cli INFO:
Generated individual log: /storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..anat..sub-03_T1w.nii.gz/GenerateReport/sub-03_T1w.html
250730-23:41:40,937 nipype.workflow INFO:
[Node] Finished "GenerateReport", elapsed time 0.183451s.
250730-23:41:42,735 nipype.workflow INFO:
[Node] Setting-up "mriqc_wf.anatMRIQC.ReportsWorkflow.dsplots" in "/storage/tmp/tmpixmeqv8h/MRIQC_workdir/mriqc_wf/anatMRIQC/ReportsWorkflow/_in_file_..storage..tmp..tmpixmeqv8h..ds000102..sub-03..anat..sub-03_T1w.nii.gz/dsplots".
250730-23:41:42,739 nipype.workflow INFO:
[Node] Executing "dsplots" <nipype.interfaces.io.DataSink>
250730-23:41:42,741 nipype.workflow INFO:
[Node] Finished "dsplots", elapsed time 0.000454s.
250730-23:41:44,688 cli IMPORTANT:
Participant level finished successfully.
250730-23:41:44,688 cli INFO:
Generating BIDS derivatives metadata.
250730-23:41:44,689 cli INFO:
MRIQC completed.
You are using MRIQC v22.0.6, and a newer version is available: 24.0.2.
Group-level Analysis#
%%bash
mriqc ds000102 \
MRIQC \
group \
--no-sub \
--work-dir MRIQC_workdir \
--nprocs 6 \
--mem-gb 10 \
--verbose-reports \
-v
You are using MRIQC v22.0.6, and a newer version is available: 24.0.2.
MRIQC Visual Reports#
MRIQC automatically generates individual and group-level reports to support the quality assessment of MRI data.
Individual reports include mosaic views of anatomical or functional images along various cutting planes, along with overlays like segmentation contours or motion estimates. These visuals help quickly screen for artifacts or other issues. They are especially useful for reviewing images that may have been flagged as low-quality by the automated classifier.
Group reports compile quality metrics across all subjects and display interactive scatter plots for each image quality metric (IQM). These plots make it easy to spot outliers—clicking on any point in the scatter plot refers to the corresponding individual report for that subject.
These embedded reports offer an intuitive way to explore quality metrics and support decisions about excluding or further examining specific runs or subjects.
Anatomical Report#
%%capture
! pip install beautifulsoup4
from bs4 import BeautifulSoup, element, Doctype
from IPython.display import HTML, display
with open('./MRIQC/sub-01_T1w.html') as f:
soup = BeautifulSoup(f, 'html.parser')
# Remove scripts and interactive elements
for tag in soup(['script', 'style', 'button', 'nav', 'head']):
tag.decompose()
with open("./soup.txt", "w") as f:
f.write(str(soup))
# print(str(soup))
display(HTML(str(soup)))
MRIQC: individual T1w report
Summary
- BIDS filename: sub-01_T1w.
- Date and time: 2025-07-30, 23:37.
- MRIQC version: 22.0.6.
- Workflow details:
- Detected a zero-filled frame, has the original image been rotated?
Visual reports
Zoomed-in (brain mask)
Background noise
Approximate spatial normalization
Brain mask
Brain tissue segmentation
Artifacts in background
Head outline
"Hat" mask
Distribution of the noise in the background
Other
For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.
Functional Report#
with open('./MRIQC/sub-02_task-flanker_run-1_bold.html') as f:
soup = BeautifulSoup(f, 'html.parser')
for tag in soup(['script', 'style', 'button', 'nav', 'head']):
tag.decompose()
display(HTML(str(soup)))
MRIQC: individual bold report
Summary
- BIDS filename: sub-02_task-flanker_run-1_bold.
- Date and time: 2025-07-30, 23:28.
- MRIQC version: 22.0.6.
- Workflow details:
- Framewise Displacement was computed using
3dvolreg(AFNI) - Framewise Displacement threshold was defined at 0.200000 mm
- Framewise Displacement was computed using
Visual reports
BOLD average
Standard deviation map
FMRI summary plot
Zoomed-in BOLD average
Background noise
Calculated brain mask
Approximate spatial normalization
Other
For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.
Group functional report#
with open('./MRIQC/group_bold.html', 'r') as f:
html = f.read()
display(HTML(html))
MRIQC: group bold report
Summary
- Date and time: 2025-07-30, 23:41.
- MRIQC version: 22.0.6.